RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 APC2O95996 2303 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 IGHG3P01860 377 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 C9orf118A6NHY6 69 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 LTBRP36941 435 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 LCN12Q6JVE5 192 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 ATAD5Q96QE3 1844 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 IGKV1-5P01602 117 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 LYL1P12980 280 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 CD24P25063 80 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 RHODO00212 210 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 ZNF664Q8N3J9 261 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 TMEM158Q8WZ71 300 aa10.69□□□□□ -0.7
HLCS-201ENST00000336648 SLC25A16P16260 332 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 SRD5A1P18405 259 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 RPL15P61313 204 aaKnown RBP10.68□□□□□ -0.7
HLCS-201ENST00000336648 CSTL1Q9H114 145 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 CABIN1Q9Y6J0 2220 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 FGFBP3Q8TAT2 258 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 PINLYPA6NC86 204 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 EREGO14944 169 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 GAGE7O76087 117 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 GAGE12FP0CL80 117 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 GAGE12GP0CL81 117 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 GAGE12IP0CL82 117 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 PYY3Q5JQD4 70 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 HAPLN4Q86UW8 402 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 CD177Q8N6Q3 437 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 SIGLEC9Q9Y336 463 aa10.68□□□□□ -0.7
HLCS-201ENST00000336648 C3orf36Q3SXR2 165 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 TRPT1Q86TN4 253 aaKnown RBP10.67□□□□□ -0.7
HLCS-201ENST00000336648 PRDM6Q9NQX0 595 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 ZNF474Q6S9Z5 364 aaPredicted RBP10.67□□□□□ -0.7
HLCS-201ENST00000336648 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 SLAQ13239 276 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 POU2AF1Q16633 256 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 LYNX1G3V0Z9 82 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 MMP23AO75900 390 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 LYNX1P0DP58 116 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 TMEM105Q8N8V8 129 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 HEATR5BQ9P2D3 2071 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 PTPRFP10586 1907 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 NDUFB8O95169 186 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 C10orf55Q5SWW7 151 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 C17orf82Q86X59 251 aaPredicted RBP10.67□□□□□ -0.7
HLCS-201ENST00000336648 TMEM141Q96I45 108 aa10.67□□□□□ -0.7
HLCS-201ENST00000336648 K7EP34 96 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 FXYD7P58549 80 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 GLRX5Q86SX6 157 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 IGKV1-27A0A075B6S5 117 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 GAGE12HA6NDE8 117 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 PSPNO60542 156 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 GATA3P23771 443 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 ANKRD29Q8N6D5 301 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 MBD3L4A6NDZ8 208 aaPredicted RBP10.66□□□□□ -0.7
HLCS-201ENST00000336648 MBD3L3A6NE82 208 aaPredicted RBP10.66□□□□□ -0.7
HLCS-201ENST00000336648 MBD3L5A6NJ08 208 aaPredicted RBP10.66□□□□□ -0.7
HLCS-201ENST00000336648 Q6P435 159 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 MBD3L2Q8NHZ7 208 aaPredicted RBP10.66□□□□□ -0.7
HLCS-201ENST00000336648 KLHDC3Q9BQ90 382 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 SHANK2-AS3Q9BTD1 123 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 PARP14Q460N5 1801 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 FOXL2NBQ6ZUU3 175 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 Q86TA4 180 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 SPXQ9BT56 116 aa10.66□□□□□ -0.7
HLCS-201ENST00000336648 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
HLCS-201ENST00000336648 PSCAO43653 123 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 COL4A5P29400 1685 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 IGHV3-73A0A0B4J1V6 119 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 Q0VG73 95 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 LIME1Q9H400 295 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 EFNA2O43921 213 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 ZNF329Q86UD4 541 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
HLCS-201ENST00000336648 ZCCHC24Q8N2G6 241 aaKnown RBP10.65□□□□□ -0.7
HLCS-201ENST00000336648 PNRC2Q9NPJ4 139 aaKnown RBP10.65□□□□□ -0.7
HLCS-201ENST00000336648 CD59P13987 128 aa10.65□□□□□ -0.71
HLCS-201ENST00000336648 SYNJ2BPP57105 145 aa10.65□□□□□ -0.71
HLCS-201ENST00000336648 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.71
HLCS-201ENST00000336648 C1orf159Q96HA4 380 aa10.65□□□□□ -0.71
HLCS-201ENST00000336648 SCN10AQ9Y5Y9 1956 aa10.65□□□□□ -0.71
HLCS-201ENST00000336648 H3BUX3 64 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 MST1P26927 711 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 K7EP13 123 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 RNASE2P10153 161 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms