RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SLAQ13239 276 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 C22orf34Q6ZV56 151 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 DPF1Q92782 380 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 SPRY4Q9C004 299 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 FNDC4Q9H6D8 234 aaPredicted RBP5.26□□□□□ -1.57
HMG20A-201ENST00000336216 LSM4Q9Y4Z0 139 aaKnown RBP5.26□□□□□ -1.57
HMG20A-201ENST00000336216 NPIPB11E5RHQ5 1161 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 ISLRO14498 428 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 IGHV1-8P0DP01 117 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 NMUP48645 174 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 FXYD7P58549 80 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 YPEL3P61236 119 aaPredicted RBP5.26□□□□□ -1.57
HMG20A-201ENST00000336216 ERVK11-1P61568 191 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 MEF2CQ06413 473 aaPredicted RBP5.26□□□□□ -1.57
HMG20A-201ENST00000336216 CLEC19AQ6UXS0 136 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 NIT1Q86X76 327 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 FAM168AQ92567 244 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 IGHV2-26A0A0B4J1V2 119 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 A8MWL6 223 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 IGLL1P15814 213 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 MSMPQ1L6U9 139 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 COX19Q49B96 90 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 GLMPQ8WWB7 406 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 C16orf92Q96LL3 132 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 KLK15Q9H2R5 256 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 COX11Q9Y6N1 276 aa5.26□□□□□ -1.57
HMG20A-201ENST00000336216 CFAP47Q6ZTR5 3102 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TRBV9A0A0B4J1U6 114 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 CX3CL1P78423 397 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 CD69Q07108 199 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TWIST1Q15672 202 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 C11orf53Q8IXP5 236 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 EXOC3-AS1Q8N2X6 119 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 KMT2EQ8IZD2 1858 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 FAM181BA6NEQ2 426 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.25□□□□□ -1.57
HMG20A-201ENST00000336216 K7ENP7 123 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 SMIM17P0DL12 118 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 GAGE1Q13065 139 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 CCL19Q99731 98 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TPSG1Q9NRR2 321 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TP53TG3Q9ULZ0 132 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 V9GYV3 84 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 PRRC2AP48634 2157 aaKnown RBP5.25□□□□□ -1.57
HMG20A-201ENST00000336216 CPAMD8Q8IZJ3 1885 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 SRRM4A7MD48 611 aaKnown RBP5.25□□□□□ -1.57
HMG20A-201ENST00000336216 MGPP08493 103 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 PRCDQ00LT1 54 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 DAZAP2Q15038 168 aaPredicted RBP5.25□□□□□ -1.57
HMG20A-201ENST00000336216 SRSF7Q16629 238 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMG20A-201ENST00000336216 SPANXN1Q5VSR9 72 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TMEM136Q6ZRR5 245 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 SEM1Q6ZVN7 128 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 C18orf32Q8TCD1 76 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 MEGF9Q9H1U4 602 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 C21orf62Q9NYP8 219 aa5.25□□□□□ -1.57
HMG20A-201ENST00000336216 TRAV40A0A0B4J280 105 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 IZUMO1RA6ND01 250 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 PMS2P5A8MQ11 134 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 TRGV3P03979 118 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 UTF1Q5T230 341 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 C12orf54Q6X4T0 127 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 NUDT10Q8NFP7 164 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 NUDT11Q96G61 164 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 BPESC1Q9GZL8 116 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 DSCAML1Q8TD84 2053 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 THBDP07204 575 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 Q5PR19 223 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 ZNF329Q86UD4 541 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 OSTCQ9NRP0 149 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 H3BUT2 72 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 M0R3E3 92 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 COX6B1P14854 86 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 Q0VG73 95 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 OR10J3Q5JRS4 329 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 ARL6IP6Q8N6S5 226 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 NUP35Q8NFH5 326 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 C5orf30Q96GV9 206 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 DMXL1Q9Y485 3027 aa5.24□□□□□ -1.57
HMG20A-201ENST00000336216 TNRC6BQ9UPQ9 1833 aaKnown RBP5.23□□□□□ -1.57
HMG20A-201ENST00000336216 IGLV3-9A0A075B6K5 115 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 TRBV6-6A0A0A6YYG2 114 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 IGHV1-3A0A0C4DH29 117 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 TMEM189A5PLL7 270 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 GGTLC3B5MD39 225 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 H0YJW9 148 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 PEX7O00628 323 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 NBR2O15453 112 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.23□□□□□ -1.57
HMG20A-201ENST00000336216 ORAOV1Q8WV07 137 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 ARPC1AQ92747 370 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.23□□□□□ -1.57
HMG20A-201ENST00000336216 C17orf58Q2M2W7 97 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 TMEM78Q5T7P6 136 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 LINC00173Q6ZV60 143 aa5.23□□□□□ -1.57
HMG20A-201ENST00000336216 C18orf15Q96N68 181 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms