RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PGPA6NDG6 321 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 K7EIM0 57 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 OR2T10Q8NGZ9 312 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 RASL11BQ9BPW5 248 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 PPP5D1E7EU14 171 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 I3L2K1 104 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 NDUFB8O95169 186 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 Q56UQ5 140 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 FAM168AQ92567 244 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 ARPC1AQ92747 370 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
LIMK1-201ENST00000336180 ISLRO14498 428 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 IGKV1-17P01599 117 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 IL4P05112 153 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 SLC25A5P05141 298 aaKnown RBP9.92□□□□□ -0.82
LIMK1-201ENST00000336180 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV4-38-2P0DP08 117 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 HYPMO75409 117 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 CBLN1P23435 193 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 Q6ZVH6 145 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 OR10G8Q8NGN5 311 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 FXYD5Q96DB9 178 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 TMEM167BQ9NRX6 74 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 ZNF207O43670 478 aaKnown RBP9.92□□□□□ -0.82
LIMK1-201ENST00000336180 PAX2Q02962 417 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
LIMK1-201ENST00000336180 CENPVL3A0A0U1RRI6 287 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 GRIFINA4D1Z8 144 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 CORTO00230 105 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 FCGR2BP31994 310 aaPredicted RBP9.91□□□□□ -0.82
LIMK1-201ENST00000336180 PMS2P11Q13670 270 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 OR8I2Q8N0Y5 310 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 MALSU1Q96EH3 234 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 SETD2Q9BYW2 2564 aaPredicted RBP9.91□□□□□ -0.82
LIMK1-201ENST00000336180 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
LIMK1-201ENST00000336180 GNG7O60262 68 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 FSTL3O95633 263 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 MRPL54Q6P161 138 aaKnown RBP9.9□□□□□ -0.82
LIMK1-201ENST00000336180 AJUBAQ96IF1 538 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 FANCD2OSQ96PS1 177 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV7-81A0A0B4J1V7 117 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 CRYGCP07315 174 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 OR1L4Q8NGR5 311 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 GNB4Q9HAV0 340 aa9.9□□□□□ -0.82
LIMK1-201ENST00000336180 FNDC10F2Z333 226 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 OVOL3O00110 214 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 ATP6V0E1O15342 81 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 PDLIM4P50479 330 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF329Q86UD4 541 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 TMEM116Q8NCL8 245 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 OR4C5Q8NGB2 326 aa9.9□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.83
LIMK1-201ENST00000336180 NPFFO15130 113 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 CRYBA4P53673 196 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 RPL15P61313 204 aaKnown RBP9.89□□□□□ -0.83
LIMK1-201ENST00000336180 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 Q8N9W7 124 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 M0R3E3 92 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 CLEC3BP05452 202 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 CITED1Q99966 193 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 SLC25A39Q9BZJ4 359 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-201ENST00000336180 HIF1ANQ9NWT6 349 aa9.89□□□□□ -0.83
LIMK1-201ENST00000336180 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
LIMK1-201ENST00000336180 MAS1LP35410 378 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 IER3P46695 156 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 AVPP01185 164 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 AMY1AP04745 511 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 GPR183P32249 361 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 SRSF1Q07955 248 aaKnown RBP eCLIP9.88□□□□□ -0.83
LIMK1-201ENST00000336180 TENM4Q6N022 2769 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 TRGV9Q99603 122 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF586Q9NXT0 402 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 CREBBPQ92793 2442 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 PEX7O00628 323 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 NDUFA3O95167 84 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 IGLV2-8P01709 118 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 CD33P20138 364 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 COL5A1-AS1Q5SY13 56 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 Q6ZS46 218 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 BAGE2Q86Y30 109 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
LIMK1-201ENST00000336180 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 NAGKQ9UJ70 344 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 FBXL7Q9UJT9 491 aa9.88□□□□□ -0.83
LIMK1-201ENST00000336180 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
LIMK1-201ENST00000336180 UBE2V1Q13404 147 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 CCDC144NLQ6NUI1 221 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 PIMREGQ9BSJ6 248 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 MRPL32Q9BYC8 188 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms