RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 EBI3Q14213 229 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 DRAM1Q8N682 238 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 ZNF441Q8N8Z8 693 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 SIT1Q9Y3P8 196 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 PTPRSQ13332 1948 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 THADAQ6YHU6 1953 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 PRSS1P07477 247 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 NNATQ16517 81 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
TDP1-201ENST00000335725 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 LINC00527Q9UJ94 153 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 NPIPB11E5RHQ5 1161 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 PEX7O00628 323 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 ACYP1P07311 99 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 UBE2D1P51668 147 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 HES3Q5TGS1 186 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 NXT2Q9NPJ8 142 aaKnown RBP6.88□□□□□ -1.31
TDP1-201ENST00000335725 IGKV1-6A0A0C4DH72 117 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 A0A1B0GUT8 65 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 ATOX1O00244 68 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 A0A1W2PR77 199 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 K7ESM1 405 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 RPS19BP1Q86WX3 136 aaKnown RBP6.87□□□□□ -1.31
TDP1-201ENST00000335725 WDR31Q8NA23 367 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 MS4A18H0YCH9 400 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 J3QQQ9 107 aa6.87□□□□□ -1.31
TDP1-201ENST00000335725 CA6P23280 308 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 UBE2L3P68036 154 aaKnown RBP6.86□□□□□ -1.31
TDP1-201ENST00000335725 LINC00336Q6ZUF6 198 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 GJC3Q8NFK1 279 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 SPTSSAQ969W0 71 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 KLF13Q9Y2Y9 288 aaPredicted RBP6.86□□□□□ -1.31
TDP1-201ENST00000335725 TCF20Q9UGU0 1960 aaKnown RBP6.86□□□□□ -1.31
TDP1-201ENST00000335725 SCN10AQ9Y5Y9 1956 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 TRBV6-6A0A0A6YYG2 114 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 TRAV17A0A0B4J275 112 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 P0C879 139 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 COX6A1P12074 109 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 MAFAQ8NHW3 353 aaPredicted RBP6.86□□□□□ -1.31
TDP1-201ENST00000335725 RNF181Q9P0P0 153 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 IGKV1-12A0A0C4DH73 117 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 IGKV1D-12P01611 117 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 SRSF9Q13242 221 aaKnown RBP eCLIP6.86□□□□□ -1.31
TDP1-201ENST00000335725 FOXL2NBQ6ZUU3 175 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 AAED1Q7RTV5 226 aa6.86□□□□□ -1.31
TDP1-201ENST00000335725 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 RTL8AQ9BWD3 113 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 C7orf69Q9H7B7 122 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 IGKV1-27A0A075B6S5 117 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 EFNA4P52798 201 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 A0A1W2PPC4 97 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 hADV29S1A0JD25 119 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 TMEM150CB9EJG8 249 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 CXCL5P42830 114 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRR20EP86478 221 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRR20CP86479 221 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRR20DP86480 221 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRR20BP86481 221 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRR20AP86496 221 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 KRTAP27-1Q3LI81 207 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 TMEM92Q6UXU6 159 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 PRIMA1Q86XR5 153 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 ORMDL3Q8N138 153 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
TDP1-201ENST00000335725 NDUFC2O95298 119 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 HERVK_113P61574 105 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 ZNF672Q499Z4 452 aaPredicted RBP6.84□□□□□ -1.31
TDP1-201ENST00000335725 TXNDC8Q6A555 127 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 MBD3L2Q8NHZ7 208 aaPredicted RBP6.84□□□□□ -1.31
TDP1-201ENST00000335725 TP53TG1Q9Y2A0 90 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 M0R135 149 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 C11orf53Q8IXP5 236 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 EXOC3-AS1Q8N2X6 119 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 ZNF799Q96GE5 643 aa6.84□□□□□ -1.31
TDP1-201ENST00000335725 WNT10BO00744 389 aa6.84□□□□□ -1.32
TDP1-201ENST00000335725 PRDX2P32119 198 aa6.84□□□□□ -1.32
TDP1-201ENST00000335725 SRRM4A7MD48 611 aaKnown RBP6.83□□□□□ -1.32
TDP1-201ENST00000335725 PLNP26678 52 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 LOXL1Q08397 574 aaPredicted RBP6.83□□□□□ -1.32
TDP1-201ENST00000335725 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 NABP1Q96AH0 204 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 EMC6Q9BV81 110 aa6.83□□□□□ -1.32
TDP1-201ENST00000335725 SPAG17Q6Q759 2223 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms