RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TOMM40O96008 361 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 RBP4P02753 201 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 ERASQ7Z444 233 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 ZFP30Q9Y2G7 519 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 INSIG2Q9Y5U4 225 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 TRAV9-2A0A087WT02 112 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 IGHV1-3A0A0C4DH29 117 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CSN3P07498 182 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 LGALS7P47929 136 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 ETFRF1Q6IPR1 90 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 FAM71F2Q6NXP2 309 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 STXBP6Q8NFX7 210 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 C22orf15Q8WYQ4 148 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CBY1Q9Y3M2 126 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 A8MWL6 223 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CCL21O00585 134 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CRYGBP07316 175 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CA7P43166 264 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 PCP4P48539 62 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 KLHDC1Q8N7A1 406 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 C8orf46Q8TAG6 207 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
VPS33B-201ENST00000333371 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 HIGD1AQ9Y241 93 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 ATRXP46100 2492 aa9.78□□□□□ -0.84
VPS33B-201ENST00000333371 IGHV1-69-2A0A0G2JMI3 117 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.77□□□□□ -0.84
VPS33B-201ENST00000333371 ZNF785A8K8V0 405 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 IGLC1P0CG04 106 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 COL8A1P27658 744 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 KLRB1Q12918 225 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 Q86TA4 180 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 BCL6BQ8N143 479 aaPredicted RBP9.77□□□□□ -0.84
VPS33B-201ENST00000333371 TEX45Q8NA69 505 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 LINC01560Q8TB33 94 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 FMC1Q96HJ9 113 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 PMCHL2Q9BQD1 86 aa9.77□□□□□ -0.84
VPS33B-201ENST00000333371 SLC25A39Q9BZJ4 359 aaPredicted RBP9.77□□□□□ -0.84
VPS33B-201ENST00000333371 F11RQ9Y624 299 aaKnown RBP9.77□□□□□ -0.84
VPS33B-201ENST00000333371 A0A1W2PRD5 423 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 A0A1W2PRF3 423 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 A0A1W2PRM7 423 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 APOBEC3AP31941 199 aaPredicted RBP9.77□□□□□ -0.85
VPS33B-201ENST00000333371 KLF17Q5JT82 389 aaPredicted RBP9.77□□□□□ -0.85
VPS33B-201ENST00000333371 C8orf31Q8N9H6 132 aa9.77□□□□□ -0.85
VPS33B-201ENST00000333371 SRSF12Q8WXF0 261 aaKnown RBP9.77□□□□□ -0.85
VPS33B-201ENST00000333371 OR4C46A6NHA9 309 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 LY6HO94772 140 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 AKAP6Q13023 2319 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 PLGLAQ15195 96 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 OR4F17Q8NGA8 305 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 FBLN7Q53RD9 439 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 PVRIGQ6DKI7 326 aa9.76□□□□□ -0.85
VPS33B-201ENST00000333371 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
VPS33B-201ENST00000333371 SPTBN1Q01082 2364 aaKnown RBP9.76□□□□□ -0.85
VPS33B-201ENST00000333371 BUB1B-PAK6H3BSN5 160 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 CHEK1O14757 476 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 IGKV1-17P01599 117 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 B9A039 149 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 OVOL3O00110 214 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 CCL25O15444 150 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 LOC102724200A0A096LPH7 203 aaPredicted RBP9.75□□□□□ -0.85
VPS33B-201ENST00000333371 I3L2K1 104 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 M0R3E3 92 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 LINC00614P0C842 121 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 RASL11BQ9BPW5 248 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 ZNF492Q9P255 531 aa9.75□□□□□ -0.85
VPS33B-201ENST00000333371 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
VPS33B-201ENST00000333371 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 RPEQ96AT9 228 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 COL6A6A6NMZ7 2263 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 CNIH1O95406 144 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 APOHP02749 345 aaPredicted RBP9.74□□□□□ -0.85
VPS33B-201ENST00000333371 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
VPS33B-201ENST00000333371 PLP1P60201 277 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 TMUB1Q9BVT8 246 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
VPS33B-201ENST00000333371 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 MRPS16Q9Y3D3 137 aaKnown RBP9.73□□□□□ -0.85
VPS33B-201ENST00000333371 HILPDAQ9Y5L2 63 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 NPIPB6E9PJ23 425 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 TIMM23O14925 209 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 MUC15Q8N387 334 aa9.73□□□□□ -0.85
VPS33B-201ENST00000333371 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms