RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PLAC1Q9HBJ0 212 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 C14orf132Q9NPU4 83 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 C18orf12Q96KH6 178 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BLQ99880 126 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 IFITM2Q01629 132 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 MPV17L2Q567V2 206 aa13.52□□□□□ -0.24
PTCH1-201ENST00000331920 RNASE6Q93091 150 aaKnown RBP13.52□□□□□ -0.24
PTCH1-201ENST00000331920 EML6Q6ZMW3 1958 aa13.52□□□□□ -0.24
PTCH1-201ENST00000331920 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.24
PTCH1-201ENST00000331920 CACNA1BQ00975 2339 aa13.52□□□□□ -0.25
PTCH1-201ENST00000331920 C8orf31Q8N9H6 132 aa13.52□□□□□ -0.25
PTCH1-201ENST00000331920 DOCK4Q8N1I0 1966 aa13.52□□□□□ -0.25
PTCH1-201ENST00000331920 STRCQ7RTU9 1775 aa13.52□□□□□ -0.25
PTCH1-201ENST00000331920 Q71RC1 249 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-201ENST00000331920 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
PTCH1-201ENST00000331920 NUP35Q8NFH5 326 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 YPEL1O60688 119 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 GZMMP51124 257 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 YPEL2Q96QA6 119 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 PRDM6Q9NQX0 595 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 C9orf106Q8NAJ2 232 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 LY6G5BQ8NDX9 201 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 C1QTNF4Q9BXJ3 329 aa13.51□□□□□ -0.25
PTCH1-201ENST00000331920 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 TM2D1Q9BX74 207 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 STPG4Q8N801 248 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 VSIRQ9H7M9 311 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 ZNF497Q6ZNH5 498 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 TRAV12-2A0A075B6T6 113 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 IGHV3-38A0A0C4DH36 116 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 LOC105371267A0A1B0GV96 52 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 CD160O95971 181 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
PTCH1-201ENST00000331920 PSME4Q14997 1843 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 ANK1P16157 1881 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 H3BUX3 64 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 PKDREJQ9NTG1 2253 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 TRBV7-1A0A0A6YYK4 115 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
PTCH1-201ENST00000331920 RPRMLQ8N4K4 120 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 ATP6V0BQ99437 205 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 TEX38Q6PEX7 206 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 FAM166AQ6J272 317 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 ZNF837Q96EG3 531 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-201ENST00000331920 LIME1Q9H400 295 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 IGKV1D-43A0A0B4J1Z2 117 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 ADAMTSL1Q8N6G6 1762 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 PRSS29PA6NIE9 313 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 AMN1Q8IY45 258 aa13.49□□□□□ -0.25
PTCH1-201ENST00000331920 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-201ENST00000331920 TIMM17AQ99595 171 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 IGHV2-26A0A0B4J1V2 119 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 A0A1W2PR77 199 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 LINC01549A6NIU2 74 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 SYNJ2BPP57105 145 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 FAM110DQ8TAY7 271 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-201ENST00000331920 ARHGAP21Q5T5U3 1957 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 CXCL1P09341 107 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 ZC2HC1BQ5TFG8 222 aa13.48□□□□□ -0.25
PTCH1-201ENST00000331920 CRYGCP07315 174 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 SLC25A48Q6ZT89 311 aaKnown RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 KLK9Q9UKQ9 250 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 UBE2CO00762 179 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 BCORQ6W2J9 1755 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 IGKV1-5P01602 117 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 PLXND1Q9Y4D7 1925 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-201ENST00000331920 C1QTNF5Q9BXJ0 243 aa13.47□□□□□ -0.25
PTCH1-201ENST00000331920 SHISA9B4DS77 424 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 AMBPP02760 352 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 AZU1P20160 251 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 FGF6P10767 208 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 UBE2V1Q13404 147 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 TP53TG1Q9Y2A0 90 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 C4orf51C9J302 202 aa13.46□□□□□ -0.25
PTCH1-201ENST00000331920 TRBV20-1A0A075B6N2 111 aa13.46□□□□□ -0.26
PTCH1-201ENST00000331920 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.26
PTCH1-201ENST00000331920 HEPN1Q6WQI6 88 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 CHCHD2Q9Y6H1 151 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-201ENST00000331920 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 GREM1O60565 184 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 ANGP03950 147 aaKnown RBP13.45□□□□□ -0.26
PTCH1-201ENST00000331920 DEFB131AP59861 70 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms