RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TRBV19A0A075B6N1 114 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 EBI3Q14213 229 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 Q56UQ5 140 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 Q86TA4 180 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 SMIM12Q96EX1 92 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 HSPB9Q9BQS6 159 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 LPAR2Q9HBW0 351 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 OR2J3O76001 311 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 NDUFB8O95169 186 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 IGLC2P0DOY2 106 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 CAMPP49913 170 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 MFAP4P55083 255 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 LMO4P61968 165 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 CIARTQ8N365 385 aaPredicted RBP11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 AJUBAQ96IF1 538 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 ASCL2Q99929 193 aa11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
CLCNKA-201ENST00000331433 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 ZNF253O75346 499 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 PRNTQ86SH4 94 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 WIPF2Q8TF74 440 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 C21orf62Q9NYP8 219 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 USP24Q9UPU5 2620 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 P01737 135 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 Q8N9W7 124 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 PRSS22Q9GZN4 317 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 ZFYVE26Q68DK2 2539 aa11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 MAP1AP78559 2803 aaPredicted RBP11.66□□□□□ -0.54
CLCNKA-201ENST00000331433 C19orf71A6NCJ1 209 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 PAX1P15863 534 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 SAA4P35542 130 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 UBE2E1P51965 193 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 IGSF10Q6WRI0 2623 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 BRS3P32247 399 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 GTSF1Q8WW33 167 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
CLCNKA-201ENST00000331433 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 A8MWP6 167 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 TBL2Q9Y4P3 447 aaKnown RBP11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF705FA8MVS1 300 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 M0R3E3 92 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
CLCNKA-201ENST00000331433 FLNCQ14315 2725 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 A0A1W2PS18 150 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 PMCHP20382 165 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 TOMM20LQ6UXN7 152 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 PGLYRP4Q96LB8 373 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF48Q96MX3 618 aaPredicted RBP11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 THYN1Q9P016 225 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 EPG5Q9HCE0 2579 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 IGHV3-35A0A0C4DH35 117 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 SH2D7A6NKC9 451 aaPredicted RBP11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 A8MWL6 223 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 IGHV4-39P01824 125 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 GPX1P07203 203 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 REC114Q7Z4M0 266 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
CLCNKA-201ENST00000331433 IGHV3OR16-8A0A075B7F1 116 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 COL8A1P27658 744 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 AMTP48728 403 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 C18orf32Q8TCD1 76 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 NOL4LQ96MY1 436 aaPredicted RBP11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 C1RLQ9NZP8 487 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF785A8K8V0 405 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 OVOL3O00110 214 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 CTSGP08311 255 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 CT83Q5H943 113 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms