RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 FOSL1P15407 271 aa12.84□□□□□ -0.35
SYNM-201ENST00000328642 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
SYNM-201ENST00000328642 CENPVQ7Z7K6 275 aaPredicted RBP12.84□□□□□ -0.35
SYNM-201ENST00000328642 RNF24Q9Y225 148 aa12.84□□□□□ -0.35
SYNM-201ENST00000328642 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
SYNM-201ENST00000328642 C5orf52A6NGY3 159 aa12.84□□□□□ -0.35
SYNM-201ENST00000328642 LINC00469Q8N7U9 141 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 IGKV1OR2-108A0A075B7D4 117 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 NDUFB8O95169 186 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 NUDT10Q8NFP7 164 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 ADAMTS20P59510 1910 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 SMIM17P0DL12 118 aa12.83□□□□□ -0.36
SYNM-201ENST00000328642 ANKRD17O75179 2603 aaKnown RBP12.83□□□□□ -0.36
SYNM-201ENST00000328642 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 HNRNPA3P51991 378 aaKnown RBP12.82□□□□□ -0.36
SYNM-201ENST00000328642 FXYD7P58549 80 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 Q6ZN92 141 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 TNFRSF14Q92956 283 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 GSN-AS1Q9NRJ2 163 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 NDUFS6O75380 124 aaKnown RBP12.82□□□□□ -0.36
SYNM-201ENST00000328642 HLA-DQA1P01909 254 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 DMDP11532 3685 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 CKS2P33552 79 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 C8orf46Q8TAG6 207 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 ST6GALNAC6Q969X2 333 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 C17orf77Q96MU5 243 aa12.82□□□□□ -0.36
SYNM-201ENST00000328642 NPFFO15130 113 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 ZNF138P52744 262 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 M0R381 172 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 SIAH2O43255 324 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 ATP6V0E1O15342 81 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
SYNM-201ENST00000328642 SNAI2O43623 268 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 FBLN7Q53RD9 439 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 DDB2Q92466 427 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
SYNM-201ENST00000328642 A6NNC1 897 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 TMEM183BQ1AE95 376 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
SYNM-201ENST00000328642 TBL2Q9Y4P3 447 aaKnown RBP12.8□□□□□ -0.36
SYNM-201ENST00000328642 TRBV24-1A0A075B6N3 115 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 A0A1B0GW64 132 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 C3orf36Q3SXR2 165 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 KCNS1Q96KK3 526 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 IGHV2-70P01814 119 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 TMEM170AQ8WVE7 144 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 A0A1B0GV90 55 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 GPX1P07203 203 aa12.79□□□□□ -0.36
SYNM-201ENST00000328642 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
SYNM-201ENST00000328642 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
SYNM-201ENST00000328642 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
SYNM-201ENST00000328642 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
SYNM-201ENST00000328642 AMBPP02760 352 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 HIST3H2BBQ8N257 126 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 LYPD6BQ8NI32 183 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 C11orf1Q9H5F2 150 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 IGLC7A0M8Q6 106 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 MT-ND6P03923 174 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 HBBP68871 147 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 C10orf91Q5T1B1 145 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 C14orf144Q96I85 54 aa12.78□□□□□ -0.36
SYNM-201ENST00000328642 TCRAP04437 139 aa12.77□□□□□ -0.36
SYNM-201ENST00000328642 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.36
SYNM-201ENST00000328642 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.36
SYNM-201ENST00000328642 KAAG1Q9UBP8 84 aa12.77□□□□□ -0.36
SYNM-201ENST00000328642 C9JCJ5 164 aa12.77□□□□□ -0.37
SYNM-201ENST00000328642 PCSK5Q92824 1860 aa12.77□□□□□ -0.37
SYNM-201ENST00000328642 TRAV41A0A0B4J266 112 aa12.77□□□□□ -0.37
SYNM-201ENST00000328642 TAS2R60P59551 318 aa12.77□□□□□ -0.37
SYNM-201ENST00000328642 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
SYNM-201ENST00000328642 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 LEPROTL1O95214 131 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 HLA-DMBP28068 263 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 TMEM136Q6ZRR5 245 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 DYNLRB2Q8TF09 96 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 UBE2CO00762 179 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 CGB3P0DN86 165 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 CGB7P0DN87 165 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
SYNM-201ENST00000328642 FAM71F2Q6NXP2 309 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 BEND2Q8NDZ0 799 aa12.76□□□□□ -0.37
SYNM-201ENST00000328642 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 CD99P14209 185 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 ERCC8Q13216 396 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 ZNF562Q6V9R5 426 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 TRGV9Q99603 122 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 KALRNO60229 2985 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms