RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DUX3Q96PT4 197 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 TMEM14CQ9P0S9 112 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 GCHFRP30047 84 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 CCL20P78556 96 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 C1orf194Q5T5A4 169 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 PAXXQ9BUH6 204 aa7.82□□□□□ -1.16
VIPAS39-201ENST00000327028 IGHV7-4-1A0A0J9YVY3 117 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 TMEM213A2RRL7 107 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 BUB3O43684 328 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 PSMB3P49720 205 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 UBE2L3P68036 154 aaKnown RBP7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 TM4SF20Q53R12 229 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 OR51M1Q9H341 326 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 TMPRSS5Q9H3S3 457 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 LOC105371267A0A1B0GV96 52 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 APOHP02749 345 aaPredicted RBP7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 PYYP10082 97 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 MYCNOSP40205 109 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 PPT1P50897 306 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 PMS2P11Q13670 270 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 BPIFA4PQ86YQ2 179 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 SUN5Q8TC36 379 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 GPR82Q96P67 336 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 TMEM167BQ9NRX6 74 aa7.81□□□□□ -1.16
VIPAS39-201ENST00000327028 A0A1W2PS18 150 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 IFNA1P01562 189 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 BMI1P35226 326 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 TMEM158Q8WZ71 300 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 GRAMD2BQ96HH9 432 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 TMEM231Q9H6L2 316 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 PEMTQ9UBM1 199 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 SMPXQ9UHP9 88 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 IGHV3-49A0A0A0MS15 119 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 NDUFA5Q16718 116 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 OR8I2Q8N0Y5 310 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 OR4F17Q8NGA8 305 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 OR9G4Q8NGQ1 327 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 GLMPQ8WWB7 406 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 MARC2Q969Z3 335 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 OR4F4Q96R69 305 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 MANBALQ9NQG1 85 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 GNG13Q9P2W3 67 aa7.8□□□□□ -1.16
VIPAS39-201ENST00000327028 IGHV3OR16-13A0A075B7E8 117 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 IGHV3-74A0A0B4J1X5 117 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 C2orf70A6NJV1 201 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 OR10J4P0C629 311 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 RAB19A4D1S5 217 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 CHEK1O14757 476 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 IGLC2P0DOY2 106 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 RHPN1-AS1Q9BWJ2 59 aa7.79□□□□□ -1.16
VIPAS39-201ENST00000327028 LOC102723971A0A1B0GUV8 181 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 BCL2P10415 239 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 EDN2P20800 178 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 GALR1P47211 349 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 A0A087X0K7 114 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 ATF4P18848 351 aaPredicted RBP7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 HAGHQ16775 308 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 TOR2AQ5JU69 321 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 ZNF586Q9NXT0 402 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 SMAD5-AS1Q9Y6J3 95 aa7.78□□□□□ -1.16
VIPAS39-201ENST00000327028 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 RBFOX3A6NFN3 312 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 H3BQ15 152 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 M0QZ24 198 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 OVOL1O14753 267 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 NBEAP1P0C6P0 100 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 CBLN1P23435 193 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 GUK1Q16774 197 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 ZNF506Q5JVG8 444 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 HELTA6NFD8 242 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 FAM74A7A6NL05 159 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 PAGE4O60829 102 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 PF4P02776 101 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 CSN3P07498 182 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 FOLR2P14207 255 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 MEOX2P50222 304 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 UBE2G2P60604 165 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 C12orf54Q6X4T0 127 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 EIF4E3Q8N5X7 224 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 ZMAT5Q9UDW3 170 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 VAX2Q9UIW0 290 aa7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 YTHDF2Q9Y5A9 579 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-201ENST00000327028 A0A1W2PRE2 83 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 PDE6HQ13956 83 aa7.76□□□□□ -1.17
VIPAS39-201ENST00000327028 ICAM4Q14773 271 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms