RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 COL6A6A6NMZ7 2263 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 GRNP28799 593 aaKnown RBP15.78■□□□□ 0.12
SOX2-201ENST00000325404 RPH3ALQ9UNE2 315 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 PKDREJQ9NTG1 2253 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 ANKHD1Q8IWZ3 2542 aaKnown RBP15.78■□□□□ 0.12
SOX2-201ENST00000325404 HAX1O00165 279 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 LYPD1Q8N2G4 141 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 SGK494Q96LW2 274 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 A6NNC1 897 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 IGLV2-11P01706 119 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 RPEQ96AT9 228 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 RASL11BQ9BPW5 248 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 TMEM70Q9BUB7 260 aa15.77■□□□□ 0.12
SOX2-201ENST00000325404 LYZP61626 148 aa15.76■□□□□ 0.11
SOX2-201ENST00000325404 BATFQ16520 125 aa15.76■□□□□ 0.11
SOX2-201ENST00000325404 LCN12Q6JVE5 192 aa15.76■□□□□ 0.11
SOX2-201ENST00000325404 PGLYRP4Q96LB8 373 aa15.76■□□□□ 0.11
SOX2-201ENST00000325404 OR5AL1P0C617 328 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 TSPOP30536 169 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 LEMD1Q68G75 181 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 SHANK2-AS3Q9BTD1 123 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 FBXL15Q9H469 300 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 LOC102724200A0A096LPH7 203 aaPredicted RBP15.75■□□□□ 0.11
SOX2-201ENST00000325404 IGHV3-21A0A0B4J1V1 117 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 PPIAL4CA0A0B4J2A2 164 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 IGKV1-17P01599 117 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 PPIAL4GP0DN37 164 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 COL8A1P27658 744 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 CDSNQ15517 529 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 FAM120AOSQ5T036 256 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 TMEM75Q8N9X5 138 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 GATD1Q8NB37 220 aa15.75■□□□□ 0.11
SOX2-201ENST00000325404 APOHP02749 345 aaPredicted RBP15.74■□□□□ 0.11
SOX2-201ENST00000325404 LHFPL4Q7Z7J7 247 aa15.74■□□□□ 0.11
SOX2-201ENST00000325404 BPIFA4PQ86YQ2 179 aa15.74■□□□□ 0.11
SOX2-201ENST00000325404 GSX1Q9H4S2 264 aaPredicted RBP15.74■□□□□ 0.11
SOX2-201ENST00000325404 ARFGEF3Q5TH69 2177 aa15.74■□□□□ 0.11
SOX2-201ENST00000325404 TRBV19A0A075B6N1 114 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 A0A1B0GW15 77 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 TMEM8BA6NDV4 472 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 APELAP0DMC3 54 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 Q56UQ5 140 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 H3BRN7 92 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 S100A7AQ86SG5 101 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 LY6G5BQ8NDX9 201 aa15.73■□□□□ 0.11
SOX2-201ENST00000325404 CHEK1O14757 476 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 STPG4Q8N801 248 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 H3BTX0 84 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 K7EIM0 57 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 OVOL3O00110 214 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 GOLT1AQ6ZVE7 132 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 OR4F17Q8NGA8 305 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 ITPR1Q14643 2758 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 PLXNB1O43157 2135 aa15.72■□□□□ 0.11
SOX2-201ENST00000325404 PKD1L2Q7Z442 2459 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 K7EQM0 130 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 NPSP0C0P6 89 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 ATOH7Q8N100 152 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 ST20Q9HBF5 79 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.71■□□□□ 0.11
SOX2-201ENST00000325404 IGHV1-24A0A0C4DH33 117 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 SIAH2O43255 324 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 IGLL1P15814 213 aa15.71■□□□□ 0.11
SOX2-201ENST00000325404 CIARTQ8N365 385 aaPredicted RBP15.71■□□□□ 0.11
SOX2-201ENST00000325404 LIPFP07098 398 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 COX7A1P24310 79 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 PLGLAQ15195 96 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 Q6AWC8 147 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 PRNTQ86SH4 94 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 EXOC3-AS1Q8N2X6 119 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 ORAOV1Q8WV07 137 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 SYS1-DBNDD2H3BUS1 97 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 MAJINQ3KP22 176 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 NPBQ8NG41 125 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 ZNF48Q96MX3 618 aaPredicted RBP15.7■□□□□ 0.1
SOX2-201ENST00000325404 RAB1BQ9H0U4 201 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 MALRD1Q5VYJ5 2156 aa15.7■□□□□ 0.1
SOX2-201ENST00000325404 TRAV30A0A087WSZ9 112 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 TRAV8-1A0A0A6YYK1 113 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 A0A1B0GUT8 65 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 LEPROTL1O95214 131 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 RIGQ13278 110 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 SIGLEC15Q6ZMC9 328 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 MUC15Q8N387 334 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 OR11H6Q8NGC7 330 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 WI2-2373I1.2A0A1W2PRP0 233 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 ZNF785A8K8V0 405 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 CNIH1O95406 144 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 TFPI2P48307 235 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 ZNF672Q499Z4 452 aaPredicted RBP15.69■□□□□ 0.1
SOX2-201ENST00000325404 KIR3DL3Q8N743 410 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 ZNF491Q8N8L2 437 aa15.69■□□□□ 0.1
SOX2-201ENST00000325404 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
SOX2-201ENST00000325404 NDUFA3O95167 84 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 NDUFB8O95169 186 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 DLX1P56177 255 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 PDE6HQ13956 83 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 PET117Q6UWS5 81 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 CLEC5AQ9NY25 188 aa15.68■□□□□ 0.1
SOX2-201ENST00000325404 TIMM23O14925 209 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms