RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GPR82Q96P67 336 aa10.34□□□□□ -0.75
PRPF18-201ENST00000320054 MDFIQ99750 246 aa10.34□□□□□ -0.75
PRPF18-201ENST00000320054 SIGLEC8Q9NYZ4 499 aa10.34□□□□□ -0.75
PRPF18-201ENST00000320054 TRAV1-1A0A0B4J248 108 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 MAP1LC3B2A6NCE7 125 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 CHEK1O14757 476 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 CSN3P07498 182 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 FOLR2P14207 255 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 SLC25A2Q9BXI2 301 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 MAP1LC3BQ9GZQ8 125 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
PRPF18-201ENST00000320054 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 CXorf1O96002 111 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 HBE1P02100 147 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
PRPF18-201ENST00000320054 RAB14P61106 215 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 KRTAP21-3Q3LHN1 58 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 LEMD1Q68G75 181 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 ADAMTSL5Q6ZMM2 481 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 BPIFA4PQ86YQ2 179 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
PRPF18-201ENST00000320054 IGHV3OR16-13A0A075B7E8 117 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 IGHV3-74A0A0B4J1X5 117 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 TEX46H3BTG2 121 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
PRPF18-201ENST00000320054 CD5P06127 495 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 NMBP08949 121 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 ARL14EPLP0DKL9 152 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 GP9P14770 177 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 EDN2P20800 178 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 SFT2D1Q8WV19 159 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 ZNF503Q96F45 646 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 OR51M1Q9H341 326 aa10.31□□□□□ -0.76
PRPF18-201ENST00000320054 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 HELTA6NFD8 242 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 HMGB3O15347 200 aaKnown RBP10.3□□□□□ -0.76
PRPF18-201ENST00000320054 OR7C2O60412 319 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 EIF3GO75821 320 aaKnown RBP eCLIP10.3□□□□□ -0.76
PRPF18-201ENST00000320054 GALR1P47211 349 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 WFDC9Q8NEX5 89 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 SUN5Q8TC36 379 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
PRPF18-201ENST00000320054 A0A087X0K7 114 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 PYYP10082 97 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 HIST1H1EP10412 219 aaKnown RBP10.29□□□□□ -0.76
PRPF18-201ENST00000320054 GCHFRP30047 84 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 PSMB3P49720 205 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 MEOX2P50222 304 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
PRPF18-201ENST00000320054 PMS2P11Q13670 270 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 GUK1Q16774 197 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 FAM90A2PQ658T7 463 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 SIGLEC15Q6ZMC9 328 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 FXYD5Q96DB9 178 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 TMEM167BQ9NRX6 74 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 MLXQ9UH92 298 aa10.29□□□□□ -0.76
PRPF18-201ENST00000320054 PPT1P50897 306 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
PRPF18-201ENST00000320054 DEFB114Q30KQ6 69 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 MCRIP2Q9BUT9 160 aaKnown RBP10.28□□□□□ -0.76
PRPF18-201ENST00000320054 HRH4Q9H3N8 390 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 SMAD5-AS1Q9Y6J3 95 aa10.28□□□□□ -0.76
PRPF18-201ENST00000320054 TRAV25A0A0B4J276 109 aa10.27□□□□□ -0.77
PRPF18-201ENST00000320054 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.77
PRPF18-201ENST00000320054 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
PRPF18-201ENST00000320054 INSL3P51460 131 aa10.27□□□□□ -0.77
PRPF18-201ENST00000320054 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.77
PRPF18-201ENST00000320054 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
PRPF18-201ENST00000320054 ZNF586Q9NXT0 402 aa10.27□□□□□ -0.77
PRPF18-201ENST00000320054 ZNF785A8K8V0 405 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 H3BQ15 152 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 ZNF253O75346 499 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 SAP30O75446 220 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 OR10J4P0C629 311 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 CD33P20138 364 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 CCL20P78556 96 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 PDE6HQ13956 83 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 C17orf77Q96MU5 243 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 ARL2-SNX15V9GYD0 113 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
PRPF18-201ENST00000320054 TRBV19A0A075B6N1 114 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms