RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PCSK5Q92824 1860 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 EPDR1Q9UM22 224 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 ISLRO14498 428 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 HOXB4P17483 251 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 NDPQ00604 133 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 CR1LQ2VPA4 569 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 DNLZQ5SXM8 178 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 BEX4Q9NWD9 120 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 PLA2G2EQ9NZK7 142 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 GPX1P07203 203 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 TRGC1P0CF51 173 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 PAX8Q06710 450 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 NSUN5P1Q3KNT7 163 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 TNRC18O15417 2968 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 IGFL4Q6B9Z1 124 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 ZNF705AQ6ZN79 300 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 Q8N7P7 452 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 IGLV1-47P01700 117 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 RNF224P0DH78 156 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 TOMM20LQ6UXN7 152 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 GPR82Q96P67 336 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 SSBP2P81877 361 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 COX19Q49B96 90 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 CYB5R2Q6BCY4 276 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 OR11H6Q8NGC7 330 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 NEU1Q99519 415 aa7.42□□□□□ -1.22
TMEM39A-201ENST00000319172 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 IGLC7A0M8Q6 106 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 PRSS1P07477 247 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 PACRGQ96M98 296 aaPredicted RBP7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 E7EUB6 86 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 OR5AL1P0C617 328 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 TWIST1Q15672 202 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 IL17RELQ6ZVW7 336 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 GLMPQ8WWB7 406 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 ATG101Q9BSB4 218 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 M0R3E3 92 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 NUTF2P61970 127 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 OTORQ9NRC9 128 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 A0A1B0GW64 132 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 ASCL2Q99929 193 aa7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 SPTBN5Q9NRC6 3674 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-201ENST00000319172 SPEGQ15772 3267 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 A0A087WWC5 75 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 FNDC10F2Z333 226 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 TEX38Q6PEX7 206 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 LINC01551Q86U37 167 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 C10orf105Q8TEF2 133 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 GCGP01275 180 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 FOXA3P55318 350 aaPredicted RBP7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 ZNF841Q6ZN19 808 aa7.4□□□□□ -1.22
TMEM39A-201ENST00000319172 SRIP30626 198 aa7.4□□□□□ -1.23
TMEM39A-201ENST00000319172 EMP1P54849 157 aa7.4□□□□□ -1.23
TMEM39A-201ENST00000319172 FAM74A4Q5TZK3 123 aa7.4□□□□□ -1.23
TMEM39A-201ENST00000319172 CENPVL3A0A0U1RRI6 287 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 ELOBQ15370 118 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 TBX15Q96SF7 602 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 PSMB11A5LHX3 300 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 C9JCJ5 164 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 M0R2Z0 102 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 CXCL1P09341 107 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 TSPOP30536 169 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 TMEM116Q8NCL8 245 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 PSG8Q9UQ74 426 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 IGKV2-40A0A087WW87 121 aaPredicted RBP7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 IGKV2D-40P01614 121 aaPredicted RBP7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 MT-ND6P03923 174 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 GATA3P23771 443 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
TMEM39A-201ENST00000319172 HTN3P15516 51 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 FAM159AQ6UWV7 190 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 WFDC12Q8WWY7 111 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 SRSF8Q9BRL6 282 aaKnown RBP7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 CELSR3Q9NYQ7 3312 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 COLCA2A8K830 154 aa7.38□□□□□ -1.23
TMEM39A-201ENST00000319172 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms