RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GAGE2BQ13066 116 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 GAGE2EQ4V326 116 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 GAGE2DQ9UEU5 116 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 TDGF1P3P51864 188 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 STPG1Q5TH74 334 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 LOC389332A0A1B0GUA5 103 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 IGHV1-2P23083 117 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 CCL8P80075 99 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 PRR32B1ATL7 298 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 COX8AP10176 69 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 ABHD17AQ96GS6 310 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 MED19A0JLT2 244 aaPredicted RBP7.25□□□□□ -1.25
COL6A5-202ENST00000312481 DOPEY1Q5JWR5 2465 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 C15orf62A8K5M9 175 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 C1orf147Q96MC9 270 aaPredicted RBP7.24□□□□□ -1.25
COL6A5-202ENST00000312481 CCL21O00585 134 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 IGHV1-69DA0A0B4J2H0 117 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 TSPAN13O95857 204 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF56Q15929 161 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 ANKRD11Q6UB99 2663 aaPredicted RBP7.24□□□□□ -1.25
COL6A5-202ENST00000312481 FOXI3A8MTJ6 420 aaPredicted RBP7.24□□□□□ -1.25
COL6A5-202ENST00000312481 MST1LQ2TV78 715 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 KRTAP27-1Q3LI81 207 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 SHANK2-AS3Q9BTD1 123 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 TMEM160Q9NX00 188 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 PRSS2P07478 247 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 ERG28Q9UKR5 140 aa7.24□□□□□ -1.25
COL6A5-202ENST00000312481 SMAD7O15105 426 aaKnown RBP7.23□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF833PQ6ZTB9 187 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 MIR17HGQ75NE6 70 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 FBXL7Q9UJT9 491 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 CXCL1P09341 107 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 CCL3L1P16619 93 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 RHOHQ15669 191 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 UTF1Q5T230 341 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 H0YJW9 148 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 FOXC2Q99958 501 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 NDUFA4L2Q9NRX3 87 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 LIME1Q9H400 295 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 NPIPB5A8MRT5 1133 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 CDKN1BP46527 198 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 PEAR1Q5VY43 1037 aaPredicted RBP7.23□□□□□ -1.25
COL6A5-202ENST00000312481 MDS2Q8NDY4 140 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 IGHV2-26A0A0B4J1V2 119 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 RPL39P5Q59GN2 51 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 HCP5Q6MZN7 132 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 SIGLEC15Q6ZMC9 328 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
COL6A5-202ENST00000312481 MYF5P13349 255 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 ADCYAP1P18509 176 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 C5orf64Q2M2E5 130 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 LDLRAD2Q5SZI1 272 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 C11orf68Q9H3H3 251 aaKnown RBP7.22□□□□□ -1.25
COL6A5-202ENST00000312481 LTBRP36941 435 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 K7EM74 188 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 SSC4DQ8WTU2 575 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF71Q9NQZ8 489 aaPredicted RBP7.22□□□□□ -1.25
COL6A5-202ENST00000312481 IGHG4P01861 327 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF841Q6ZN19 808 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 MRPL20Q9BYC9 149 aaKnown RBP7.22□□□□□ -1.25
COL6A5-202ENST00000312481 RNASE7Q9H1E1 156 aaKnown RBP7.22□□□□□ -1.25
COL6A5-202ENST00000312481 IGKV1D-43A0A0B4J1Z2 117 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 HLA-DMBP28068 263 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 IGHV3OR15-7A0A075B7D8 119 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 IGHV1-8P0DP01 117 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 VDAC2P45880 294 aaPredicted RBP7.22□□□□□ -1.25
COL6A5-202ENST00000312481 BSPH1Q075Z2 132 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 GGTLC3B5MD39 225 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 H3BMM0 161 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 FZR1Q9UM11 496 aa7.22□□□□□ -1.25
COL6A5-202ENST00000312481 FOXF2Q12947 444 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 Q86TA4 180 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 TLN2Q9Y4G6 2542 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.25
COL6A5-202ENST00000312481 OCIAD2Q56VL3 154 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 SEPSECSQ9HD40 501 aaKnown RBP7.21□□□□□ -1.25
COL6A5-202ENST00000312481 MNX1P50219 401 aaPredicted RBP7.21□□□□□ -1.25
COL6A5-202ENST00000312481 PLPPR2Q96GM1 343 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 DMRTA2Q96SC8 542 aa7.21□□□□□ -1.25
COL6A5-202ENST00000312481 TMEM178BH3BS89 294 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 ZNRF1Q8ND25 227 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 IGKV1-27A0A075B6S5 117 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 PSMB11A5LHX3 300 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 IFITM1P13164 125 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 ALKBH6Q3KRA9 238 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 WNT10AQ9GZT5 417 aa7.21□□□□□ -1.26
COL6A5-202ENST00000312481 PAX8Q06710 450 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms