RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 RSPO3Q9BXY4 272 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-201ENST00000312413 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 C9JQL5 133 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 FREM3P0C091 2139 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 TMEM200BQ69YZ2 307 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 Q6ZS49 121 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 FNDC10F2Z333 226 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 Q86TA4 180 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 CD177Q8N6Q3 437 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 SPTBN1Q01082 2364 aaKnown RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 PINLYPA6NC86 204 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-201ENST00000312413 A0A0G2JRQ6 117 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
CLCN6-201ENST00000312413 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 COL4A1P02462 1669 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 H0YJW9 148 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 GGNQ86UU5 652 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 VGLL1Q99990 258 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 ZNF415Q09FC8 603 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 C5orf24Q7Z6I8 188 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 MPDZO75970 2070 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 Q6ZRM9 215 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
CLCN6-201ENST00000312413 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 IGHV2-70P01814 119 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 CSRP2Q16527 193 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 SPXQ9BT56 116 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 C5orf63A6NC05 138 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 IGLC3P0DOY3 106 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 DIDO1Q9BTC0 2240 aaKnown RBP11.16□□□□□ -0.62
CLCN6-201ENST00000312413 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-201ENST00000312413 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 LIME1Q9H400 295 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
CLCN6-201ENST00000312413 A0A1B0GUS0 222 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
CLCN6-201ENST00000312413 ERCC8Q13216 396 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 Q6P435 159 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 DOCK4Q8N1I0 1966 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 DTX1Q86Y01 620 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 MESP1Q9BRJ9 268 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 ZNF236Q9UL36 1845 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 H3BMM0 161 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 SLAQ13239 276 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 UBE2WQ96B02 151 aa11.15□□□□□ -0.62
CLCN6-201ENST00000312413 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-201ENST00000312413 TRGV1A0A0A0MS02 117 aa11.15□□□□□ -0.63
CLCN6-201ENST00000312413 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.63
CLCN6-201ENST00000312413 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.63
CLCN6-201ENST00000312413 LILRA1O75019 489 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 NPSP0C0P6 89 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 NDPQ00604 133 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-201ENST00000312413 MINOS1Q5TGZ0 78 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 MINOS1-NBL1R4GNA1 71 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 CACNA1EQ15878 2313 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 FCN3O75636 299 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
CLCN6-201ENST00000312413 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 INSP01308 110 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 PDE6HQ13956 83 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 ETDBQ3ZM63 59 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 MRAPQ8TCY5 172 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 POLEQ07864 2286 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 CT83Q5H943 113 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 VMO1Q7Z5L0 202 aa11.13□□□□□ -0.63
CLCN6-201ENST00000312413 LINC00205P59089 165 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 LRRK1Q38SD2 2015 aa11.12□□□□□ -0.63
CLCN6-201ENST00000312413 A0A087WWL8 130 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms