RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 DNAJC4Q9NNZ3 241 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 AGRNO00468 2067 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 PRB4P10163 310 aaPredicted RBP6.76□□□□□ -1.33
PDE4D-201ENST00000309641 DEFB1P60022 68 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 C1orf194Q5T5A4 169 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 TCTE3Q8IZS6 198 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 SCGB1C1Q8TD33 95 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 SH3BGRL3Q9H299 93 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 MAP6D1Q9H9H5 199 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
PDE4D-201ENST00000309641 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 HELTA6NFD8 242 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 H3BTX0 84 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
PDE4D-201ENST00000309641 FRMD6-AS1P0C7T7 363 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 DEFB131AP59861 70 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 FFAR4Q5NUL3 377 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF709Q8N972 641 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 CYTL1Q9NRR1 136 aa6.75□□□□□ -1.33
PDE4D-201ENST00000309641 ELOA3CA0A087WX78 387 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-201ENST00000309641 RBMY1BA6NDE4 496 aaKnown RBP6.74□□□□□ -1.33
PDE4D-201ENST00000309641 RBMY1EA6NEQ0 496 aaKnown RBP6.74□□□□□ -1.33
PDE4D-201ENST00000309641 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 SOCS3O14543 225 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 CD5P06127 495 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 RBMY1DP0C7P1 496 aaKnown RBP6.74□□□□□ -1.33
PDE4D-201ENST00000309641 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 PAFAH1B2P68402 229 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 PXDC1Q5TGL8 231 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 MIR17HGQ75NE6 70 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 AKAP14Q86UN6 197 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 KCNRGQ8N5I3 272 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 ASCL2Q99929 193 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 PARD6GQ9BYG4 376 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-201ENST00000309641 PFDN2Q9UHV9 154 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 H3BQ15 152 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF266Q14584 549 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 FAM78BQ5VT40 261 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 OR1L4Q8NGR5 311 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 GATAD1Q8WUU5 269 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 SRD5A3Q9H8P0 318 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 DNAH9Q9NYC9 4486 aa6.74□□□□□ -1.33
PDE4D-201ENST00000309641 TRAV2A0A0B4J234 112 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 C17orf112F2Z3M2 114 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 GALR1P47211 349 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 RAB2AP61019 212 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 LGALSLQ3ZCW2 172 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-201ENST00000309641 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 PFDN5Q99471 154 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 TUBA4BQ9H853 241 aa6.73□□□□□ -1.33
PDE4D-201ENST00000309641 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 C1QBP02746 253 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 PYYP10082 97 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF345Q14585 488 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 LINC00322Q6ZN03 302 aaPredicted RBP6.72□□□□□ -1.33
PDE4D-201ENST00000309641 RNF182Q8N6D2 247 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 A8MZ25 164 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 SLC17A3O00476 420 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 HMGB3O15347 200 aaKnown RBP6.72□□□□□ -1.33
PDE4D-201ENST00000309641 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 GDF5OSQ5U4N7 250 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 FAM110AQ9BQ89 295 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 TIMM9Q9Y5J7 89 aa6.72□□□□□ -1.33
PDE4D-201ENST00000309641 F6UB75 175 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.33
PDE4D-201ENST00000309641 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.33
PDE4D-201ENST00000309641 BPIFA4PQ86YQ2 179 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 RPP25LQ8N5L8 163 aaKnown RBP6.71□□□□□ -1.33
PDE4D-201ENST00000309641 C16orf92Q96LL3 132 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 GPR82Q96P67 336 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 B9D2Q9BPU9 175 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 ARPC5LQ9BPX5 153 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 KCNIP2Q9NS61 270 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 FUT9Q9Y231 359 aa6.71□□□□□ -1.33
PDE4D-201ENST00000309641 A0A087X0K7 114 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 BORCS7-ASMTA0A0B4J1R7 106 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 A0A0D9SG52 128 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 TAAR5O14804 337 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 BCL2L11O43521 198 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 JTBO76095 146 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 OR10J4P0C629 311 aa6.71□□□□□ -1.34
PDE4D-201ENST00000309641 M6PRP20645 277 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms