RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MRPS12O15235 138 aaKnown RBP16.54■□□□□ 0.24
ATG4D-201ENST00000309469 IGLC2P0DOY2 106 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 MEOX2P50222 304 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 FAM3BP58499 235 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-201ENST00000309469 FOXL1Q12952 345 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 CCDC140Q96MF4 163 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 OTORQ9NRC9 128 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 POLQO75417 2590 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 PHOX2AO14813 284 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 GCGP01275 180 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 TRGC1P0CF51 173 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 NDUFA6P56556 154 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 BLCAPP62952 87 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 ATP5G2Q06055 141 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 CLEC19AQ6UXS0 136 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 PSMG3-AS1Q96PY0 264 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 TRBV19A0A075B6N1 114 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 TRAV34A0A0B4J273 112 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 S100A8P05109 93 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 ERVFC1-1P60608 527 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 TMEM183BQ1AE95 376 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 KRTAP1-3Q8IUG1 177 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 ZNF414Q96IQ9 312 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 BTF3L4Q96K17 158 aa16.53■□□□□ 0.24
ATG4D-201ENST00000309469 CHD6Q8TD26 2715 aa16.52■□□□□ 0.24
ATG4D-201ENST00000309469 ISLRO14498 428 aa16.52■□□□□ 0.23
ATG4D-201ENST00000309469 TYMSP04818 313 aa16.52■□□□□ 0.23
ATG4D-201ENST00000309469 ATG101Q9BSB4 218 aa16.52■□□□□ 0.23
ATG4D-201ENST00000309469 RABAC1Q9UI14 185 aa16.52■□□□□ 0.23
ATG4D-201ENST00000309469 KLF12Q9Y4X4 402 aa16.52■□□□□ 0.23
ATG4D-201ENST00000309469 FAM223BA6NKX1 122 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 BAGE2Q86Y30 109 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 FAM223AQ8IWN6 122 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 C17orf77Q96MU5 243 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 RPH3ALQ9UNE2 315 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 PTPN13Q12923 2485 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 BMPR1BO00238 502 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 FSHBP01225 129 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 IGHV4-59P01825 116 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 TCRAP04437 139 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 MGST1P10620 155 aaKnown RBP16.51■□□□□ 0.23
ATG4D-201ENST00000309469 HIST2H2BCQ6DN03 193 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
ATG4D-201ENST00000309469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.5■□□□□ 0.239e-7■■■□□ 18.2
ATG4D-201ENST00000309469 CELSR1Q9NYQ6 3014 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 SLC17A3O00476 420 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 TRGV3P03979 118 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 HOXA5P20719 270 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 PPIFP30405 207 aaKnown RBP16.5■□□□□ 0.23
ATG4D-201ENST00000309469 UBE2G1P62253 170 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 Q6ZS46 218 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 EXOC3-AS1Q8N2X6 119 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 NOL4LQ96MY1 436 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-201ENST00000309469 GNB4Q9HAV0 340 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 OSTCQ9NRP0 149 aa16.5■□□□□ 0.23
ATG4D-201ENST00000309469 BRI3O95415 125 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 S100A9P06702 114 aaKnown RBP16.49■□□□□ 0.23
ATG4D-201ENST00000309469 SMIM6P0DI80 62 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 LYPD1Q8N2G4 141 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 NHLRC2Q8NBF2 726 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 TMEM190Q8WZ59 177 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 ATP6V0BQ99437 205 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 ZFAND3Q9H8U3 227 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 IL36BQ9NZH7 164 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 V9GYV3 84 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 TENM4Q6N022 2769 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 ZNF320A2RRD8 509 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 S100A7P31151 101 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 IER3P46695 156 aa16.49■□□□□ 0.23
ATG4D-201ENST00000309469 RNASE7Q9H1E1 156 aaKnown RBP16.49■□□□□ 0.23
ATG4D-201ENST00000309469 H3BUA1 57 aa16.48■□□□□ 0.23
ATG4D-201ENST00000309469 SIGLEC15Q6ZMC9 328 aa16.48■□□□□ 0.23
ATG4D-201ENST00000309469 CMTM2Q8TAZ6 248 aa16.48■□□□□ 0.23
ATG4D-201ENST00000309469 IGHV3OR16-8A0A075B7F1 116 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 RPL7P18124 248 aaKnown RBP16.47■□□□□ 0.23
ATG4D-201ENST00000309469 CYB5R2Q6BCY4 276 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 C9orf139Q6ZV77 190 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 FMC1Q96HJ9 113 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 SGK494Q96LW2 274 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 PCP4L1A6NKN8 68 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 TPPP2P59282 170 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 ACTL10Q5JWF8 245 aa16.47■□□□□ 0.23
ATG4D-201ENST00000309469 NAV2Q8IVL1 2488 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 TRAV9-1A0A075B6T8 112 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 CDX1P47902 265 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-201ENST00000309469 PDE6HQ13956 83 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 RPEL1Q2QD12 228 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 IBA57Q5T440 356 aaKnown RBP16.46■□□□□ 0.23
ATG4D-201ENST00000309469 OR5R1Q8NH85 324 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 GPR82Q96P67 336 aa16.46■□□□□ 0.23
ATG4D-201ENST00000309469 RPL15P61313 204 aaKnown RBP16.45■□□□□ 0.22
ATG4D-201ENST00000309469 RELQ04864 619 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-201ENST00000309469 OR8I2Q8N0Y5 310 aa16.45■□□□□ 0.22
ATG4D-201ENST00000309469 SMIM12Q96EX1 92 aa16.45■□□□□ 0.22
ATG4D-201ENST00000309469 ABCA12Q86UK0 2595 aa16.45■□□□□ 0.22
ATG4D-201ENST00000309469 USMG5Q96IX5 58 aa16.45■□□□□ 0.22
ATG4D-201ENST00000309469 CR1P17927 2039 aa16.44■□□□□ 0.22
ATG4D-201ENST00000309469 CLPSL1A2RUU4 121 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms