RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ADMP35318 185 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 KRTAP10-9P60411 292 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 ERVFC1-1P60608 527 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 RPL15P61313 204 aaKnown RBP5.11□□□□□ -1.59
USP47-201ENST00000305481 ECSCRQ19T08 205 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 CHRDL1Q9BU40 450 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 Q9H3A6 140 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 IL36BQ9NZH7 164 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 RNF24Q9Y225 148 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 KLF12Q9Y4X4 402 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 TRBV9A0A0B4J1U6 114 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 ZNF320A2RRD8 509 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 SLC25A5P05141 298 aaKnown RBP5.11□□□□□ -1.59
USP47-201ENST00000305481 FRMD6-AS1P0C7T7 363 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 IGLC2P0DOY2 106 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 HIST1H1EP10412 219 aaKnown RBP5.11□□□□□ -1.59
USP47-201ENST00000305481 COX6B1P14854 86 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 Q56UQ5 140 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 ACTL10Q5JWF8 245 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 SGK494Q96LW2 274 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 ABCA12Q86UK0 2595 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 COL8A1P27658 744 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 FCGR2BP31994 310 aaPredicted RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 CNN1P51911 297 aaKnown RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 DEFA6Q01524 100 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 TMEM183BQ1AE95 376 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 C19orf54Q5BKX5 351 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 EXOC3-AS1Q8N2X6 119 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 TCEAL7Q9BRU2 100 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 HIF1ANQ9NWT6 349 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 THYN1Q9P016 225 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 MGST1P10620 155 aaKnown RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 RHOGP84095 191 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 C15orf32Q32M92 178 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 Q5PR19 223 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 BAGE2Q86Y30 109 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 ZNF502Q8TBZ5 544 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 OSTCQ9NRP0 149 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 CHTOPQ9Y3Y2 248 aaKnown RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 CHD6Q8TD26 2715 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 TENM4Q6N022 2769 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.1□□□□□ -1.591e-6■■■■□ 25.3
USP47-201ENST00000305481 TRBV19A0A075B6N1 114 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 B4DSR2 109 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 TCRAP04437 139 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 CDX1P47902 265 aaPredicted RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 DSCR9P59020 149 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 Q71RC1 249 aaPredicted RBP5.1□□□□□ -1.59
USP47-201ENST00000305481 C5orf17Q8NAS9 161 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 VN1R17PQ8TDU5 208 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 MOB4Q9Y3A3 225 aa5.1□□□□□ -1.59
USP47-201ENST00000305481 ZNF469Q96JG9 3925 aaPredicted RBP5.09□□□□□ -1.59
USP47-201ENST00000305481 HIST1H1BP16401 226 aaKnown RBP5.09□□□□□ -1.59
USP47-201ENST00000305481 IBA57Q5T440 356 aaKnown RBP5.09□□□□□ -1.59
USP47-201ENST00000305481 TXN2Q99757 166 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 OTORQ9NRC9 128 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 IGHV3-35A0A0C4DH35 117 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 CA1P00915 261 aaPredicted RBP5.09□□□□□ -1.59
USP47-201ENST00000305481 IGLV2-11P01706 119 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 PRB4P10163 310 aaPredicted RBP5.09□□□□□ -1.59
USP47-201ENST00000305481 RPEL1Q2QD12 228 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 BPIFA4PQ86YQ2 179 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 MS4A10Q96PG2 267 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 LINC00527Q9UJ94 153 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 APCP25054 2843 aa5.09□□□□□ -1.59
USP47-201ENST00000305481 CSPG4Q6UVK1 2322 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 IGHV3OR16-8A0A075B7F1 116 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 LTAP01374 205 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 CLEC3BP05452 202 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 LY6EQ16553 131 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 SIGLEC15Q6ZMC9 328 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 LINC00322Q6ZN03 302 aaPredicted RBP5.09□□□□□ -1.6
USP47-201ENST00000305481 OR8I2Q8N0Y5 310 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 MAPK1IP1LQ8NDC0 245 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 GPR61Q9BZJ8 451 aa5.09□□□□□ -1.6
USP47-201ENST00000305481 TRAV9-1A0A075B6T8 112 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 TRAV8-1A0A0A6YYK1 113 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SMIM27A0A1W2PRY6 76 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 A6NDX4 124 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 H3BUX3 64 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SLC25A16P16260 332 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 GPR183P32249 361 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 PDZD11Q5EBL8 140 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 S100A7AQ86SG5 101 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 NUDT10Q8NFP7 164 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 MBD6Q96DN6 1003 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 NUDT11Q96G61 164 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 TRAPPC1Q9Y5R8 145 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 ZNF785A8K8V0 405 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 S100A8P05109 93 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 CRIP2P52943 208 aaPredicted RBP5.08□□□□□ -1.6
USP47-201ENST00000305481 TCL1AP56279 114 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 UBE2G1P62253 170 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 SAPCD1Q5SSQ6 148 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 Q6ZS46 218 aa5.08□□□□□ -1.6
USP47-201ENST00000305481 FMC1Q96HJ9 113 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms