RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 RAB24Q969Q5 203 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 PFDN5Q99471 154 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 KCNIP2Q9NS61 270 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 PGPEP1Q9NXJ5 209 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 FUT9Q9Y231 359 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 NOTCH3Q9UM47 2321 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 H3BQ15 152 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 GP9P14770 177 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 CD33P20138 364 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 SULT1A2P50226 295 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 EIF5AP63241 154 aaKnown RBP7.12□□□□□ -1.27
RFX3-201ENST00000302303 ACOT6Q3I5F7 207 aaPredicted RBP7.12□□□□□ -1.27
RFX3-201ENST00000302303 FAM122CQ6P4D5 195 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 TEX261Q6UWH6 196 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 PHYHIPLQ96FC7 376 aa7.12□□□□□ -1.27
RFX3-201ENST00000302303 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 SAP30O75446 220 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 MBP02144 154 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 STAG3L2P0CL84 134 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 STAG3L3P0CL85 134 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 IGLC2P0DOY2 106 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 C4BPBP20851 252 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 ZNF680Q8NEM1 530 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 SUN5Q8TC36 379 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 DCANP1Q8TF63 244 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 MBD3L1Q8WWY6 194 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 SAT2Q96F10 170 aaPredicted RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 MRPL32Q9BYC8 188 aaKnown RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 SLC25A22Q9H936 323 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 A0A1W2PS18 150 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 UMAD1C9J7I0 102 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 G3V4G9 280 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 SOCS3O14543 225 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 SNRPCP09234 159 aaKnown RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 PYYP10082 97 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 CDC34P49427 236 aaPredicted RBP7.11□□□□□ -1.27
RFX3-201ENST00000302303 INSL3P51460 131 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 RHOBP62745 196 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 SAMD5Q5TGI4 173 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 ZNF586Q9NXT0 402 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 TMEM14CQ9P0S9 112 aa7.11□□□□□ -1.27
RFX3-201ENST00000302303 TSPAN4O14817 238 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 NDUFB4O95168 129 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 EGFEM1PQ0D2K5 195 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 AKR1C8PQ5T2L2 129 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 SIGLEC15Q6ZMC9 328 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 FAM24BQ8N5W8 94 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 MCRIP2Q9BUT9 160 aaKnown RBP7.1□□□□□ -1.27
RFX3-201ENST00000302303 MS4A6AQ9H2W1 248 aa7.1□□□□□ -1.27
RFX3-201ENST00000302303 A0A087X0K7 114 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 TRAV8-2A0A0B4J237 113 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 CTXND1A0A1B0GTU2 59 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 H3BTX0 84 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 K7EQG2 157 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 SLC17A3O00476 420 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.27
RFX3-201ENST00000302303 CCL20P78556 96 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 EIF5AL1Q6IS14 154 aaKnown RBP7.09□□□□□ -1.27
RFX3-201ENST00000302303 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 BPIFA4PQ86YQ2 179 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 OR2K2Q8NGT1 345 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 LYPD6BQ8NI32 183 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 FAM213BQ8TBF2 198 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 ACTR3CQ9C0K3 210 aaPredicted RBP7.09□□□□□ -1.27
RFX3-201ENST00000302303 OR51M1Q9H341 326 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 HRH4Q9H3N8 390 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 TMPRSS5Q9H3S3 457 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 C19orf73Q9NVV2 129 aa7.09□□□□□ -1.27
RFX3-201ENST00000302303 IGKV3-7A0A075B6H7 116 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 A0A1W2PPV4 95 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 A6NJY4 79 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 OR10J4P0C629 311 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 ARL14EPLP0DKL9 152 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 HIST1H1EP10412 219 aaKnown RBP7.08□□□□□ -1.28
RFX3-201ENST00000302303 RAB5CP51148 216 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 FGF8P55075 233 aaPredicted RBP7.08□□□□□ -1.28
RFX3-201ENST00000302303 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 GBGT1Q8N5D6 347 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 DYNLRB2Q8TF09 96 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 RNF141Q8WVD5 230 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 GRAMD2BQ96HH9 432 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 GPR82Q96P67 336 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 PAXXQ9BUH6 204 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 TMEM231Q9H6L2 316 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 PFDN2Q9UHV9 154 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
RFX3-201ENST00000302303 NBEAL1Q6ZS30 2694 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
RFX3-201ENST00000302303 HELTA6NFD8 242 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms