RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZFAND3Q9H8U3 227 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 RABAC1Q9UI14 185 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 CDC42EP3Q9UKI2 254 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 CREBBPQ92793 2442 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 ZFHX3Q15911 3703 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 H3BUA1 57 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 TPPP2P59282 170 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 OR5I1Q13606 314 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 OTORQ9NRC9 128 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 C1orf196B1AJZ1 125 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 PPP1R2P9O14990 202 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 RPS10P46783 165 aaKnown RBP17.25■□□□□ 0.35
SMAD1-201ENST00000302085 C5orf17Q8NAS9 161 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 OR10G8Q8NGN5 311 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 FAM210BQ96KR6 192 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 OR5B12Q96R08 314 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 ATP6V0BQ99437 205 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 KLK15Q9H2R5 256 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 RNF24Q9Y225 148 aa17.25■□□□□ 0.35
SMAD1-201ENST00000302085 TRBV24-1A0A075B6N3 115 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 SMAD7O15105 426 aaKnown RBP17.24■□□□□ 0.35
SMAD1-201ENST00000302085 FLI1Q01543 452 aaPredicted RBP17.24■□□□□ 0.35
SMAD1-201ENST00000302085 CFHR3Q02985 330 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 EXOC3-AS1Q8N2X6 119 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 PRDM13Q9H4Q3 707 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 NBPF19A0A087WUL8 3843 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 PPP5D1E7EU14 171 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 BMPR1BO00238 502 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 ISLRO14498 428 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 IGLV1-40P01703 118 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 PYGO2Q9BRQ0 406 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 KLF12Q9Y4X4 402 aa17.24■□□□□ 0.35
SMAD1-201ENST00000302085 GCGP01275 180 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 TMEM183BQ1AE95 376 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 TMEM95Q3KNT9 176 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 ZNF580Q9UK33 172 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 VPREB3Q9UKI3 123 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 RPH3ALQ9UNE2 315 aa17.23■□□□□ 0.35
SMAD1-201ENST00000302085 CLPSL1A2RUU4 121 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 S100PP25815 95 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 SRP14P37108 136 aaKnown RBP17.22■□□□□ 0.35
SMAD1-201ENST00000302085 RPL15P61313 204 aaKnown RBP17.22■□□□□ 0.35
SMAD1-201ENST00000302085 USMG5Q96IX5 58 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 ATG101Q9BSB4 218 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 SLC17A3O00476 420 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 TCRAP04437 139 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 PF4V1P10720 104 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 RAB5BP61020 215 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 C1QL4Q86Z23 238 aa17.22■□□□□ 0.35
SMAD1-201ENST00000302085 SIGLEC15Q6ZMC9 328 aa17.21■□□□□ 0.35
SMAD1-201ENST00000302085 BAGE2Q86Y30 109 aa17.21■□□□□ 0.35
SMAD1-201ENST00000302085 HOXA3O43365 443 aaPredicted RBP17.2■□□□□ 0.34
SMAD1-201ENST00000302085 LCNL1Q6ZST4 164 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 NHLRC2Q8NBF2 726 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 SGK494Q96LW2 274 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 FOXC2Q99958 501 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 SMAD5-AS1Q9Y6J3 95 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 TEX15Q9BXT5 2789 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 PDZD2O15018 2839 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 ITPR3Q14573 2671 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 GGCTO75223 188 aaKnown RBP17.2■□□□□ 0.34
SMAD1-201ENST00000302085 TRBV12-3P01733 135 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 RPL7P18124 248 aaKnown RBP17.2■□□□□ 0.34
SMAD1-201ENST00000302085 FAM3BP58499 235 aaPredicted RBP17.2■□□□□ 0.34
SMAD1-201ENST00000302085 RELQ04864 619 aaPredicted RBP17.2■□□□□ 0.34
SMAD1-201ENST00000302085 OR8I2Q8N0Y5 310 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 LYPD1Q8N2G4 141 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 IMMP2LQ96T52 175 aa17.2■□□□□ 0.34
SMAD1-201ENST00000302085 ARL3P36405 182 aa17.19■□□□□ 0.34
SMAD1-201ENST00000302085 ERVFC1-1P60608 527 aa17.19■□□□□ 0.34
SMAD1-201ENST00000302085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.19■□□□□ 0.34
SMAD1-201ENST00000302085 IGHV3-11P01762 117 aa17.19■□□□□ 0.34
SMAD1-201ENST00000302085 MGST1P10620 155 aaKnown RBP17.19■□□□□ 0.34
SMAD1-201ENST00000302085 S100A7P31151 101 aa17.19■□□□□ 0.34
SMAD1-201ENST00000302085 RAB9AP51151 201 aa17.19■□□□□ 0.34
SMAD1-201ENST00000302085 RNASE7Q9H1E1 156 aaKnown RBP17.19■□□□□ 0.34
SMAD1-201ENST00000302085 UBE2G1P62253 170 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 FOXL1Q12952 345 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 KCNIP4Q6PIL6 250 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 IL17RELQ6ZVW7 336 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 CMTM2Q8TAZ6 248 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 V9GYV3 84 aa17.18■□□□□ 0.34
SMAD1-201ENST00000302085 A0A1W2PPQ1 181 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 BUB3O43684 328 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 S100A9P06702 114 aaKnown RBP17.17■□□□□ 0.34
SMAD1-201ENST00000302085 PDE6HQ13956 83 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 OSTCQ9NRP0 149 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 CCDC168Q8NDH2 2452 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 FMC1Q96HJ9 113 aa17.17■□□□□ 0.34
SMAD1-201ENST00000302085 ZNF207O43670 478 aaKnown RBP17.16■□□□□ 0.34
SMAD1-201ENST00000302085 IGHG4P01861 327 aa17.16■□□□□ 0.34
SMAD1-201ENST00000302085 APOHP02749 345 aaPredicted RBP17.16■□□□□ 0.34
SMAD1-201ENST00000302085 GOLT1AQ6ZVE7 132 aa17.16■□□□□ 0.34
SMAD1-201ENST00000302085 OR4X2Q8NGF9 303 aa17.16■□□□□ 0.34
SMAD1-201ENST00000302085 TMEM190Q8WZ59 177 aa17.16■□□□□ 0.34
SMAD1-201ENST00000302085 IGLV2-11P01706 119 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 TRGC2P03986 189 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 SIGLECL1Q8N7X8 197 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 GPR82Q96P67 336 aa17.15■□□□□ 0.34
SMAD1-201ENST00000302085 PRSS22Q9GZN4 317 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms