RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TRAV8-1A0A0A6YYK1 113 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 RBP4P02753 201 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 ZNF672Q499Z4 452 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-204ENST00000300862 TNFRSF14Q92956 283 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 GRAMD2BQ96HH9 432 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 HILPDAQ9Y5L2 63 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 S4R3C0 116 aa10.26□□□□□ -0.77
HIF3A-204ENST00000300862 GP9P14770 177 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 SSX8Q7RTT4 187 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 KLHDC1Q8N7A1 406 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 ASCL2Q99929 193 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 Q9H3A6 140 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
HIF3A-204ENST00000300862 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 TIMM23O14925 209 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 CNIH1O95406 144 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 ARF6P62330 175 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 PVRIGQ6DKI7 326 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
HIF3A-204ENST00000300862 IGLC1P0CG04 106 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 FBLN7Q53RD9 439 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 STXBP6Q8NFX7 210 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 C8orf46Q8TAG6 207 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
HIF3A-204ENST00000300862 KLRD1Q13241 179 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 UBE2V1Q13404 147 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 KLF17Q5JT82 389 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-204ENST00000300862 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 OR4F17Q8NGA8 305 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 GPR82Q96P67 336 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
HIF3A-204ENST00000300862 FAM181BA6NEQ2 426 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 HIST1H1EP10412 219 aaKnown RBP10.23□□□□□ -0.77
HIF3A-204ENST00000300862 CDKN1BP46527 198 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 SPATA12Q7Z6I5 190 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 HIGD1AQ9Y241 93 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 SPTBN4Q9H254 2564 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 CCL21O00585 134 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 TCRAP04437 139 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 C17orf77Q96MU5 243 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
HIF3A-204ENST00000300862 I3L2K1 104 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 K7EP13 123 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 IGLL1P15814 213 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 Q56UQ5 140 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 CIARTQ8N365 385 aaPredicted RBP10.22□□□□□ -0.77
HIF3A-204ENST00000300862 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 ZNF738Q8NE65 137 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 PGLYRP4Q96LB8 373 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 MLST8Q9BVC4 326 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
HIF3A-204ENST00000300862 TRAV9-2A0A087WT02 112 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 OR8B3Q8NGG8 313 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 WIPF2Q8TF74 440 aaPredicted RBP10.22□□□□□ -0.77
HIF3A-204ENST00000300862 GTSF1Q8WW33 167 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 OR8B2Q96RD0 313 aa10.22□□□□□ -0.77
HIF3A-204ENST00000300862 C2orf70A6NJV1 201 aa10.21□□□□□ -0.77
HIF3A-204ENST00000300862 LY6LH3BQJ8 138 aa10.21□□□□□ -0.77
HIF3A-204ENST00000300862 M0QZ24 198 aa10.21□□□□□ -0.77
HIF3A-204ENST00000300862 HSBP1O75506 76 aa10.21□□□□□ -0.77
HIF3A-204ENST00000300862 FOXA3P55318 350 aaPredicted RBP10.21□□□□□ -0.77
HIF3A-204ENST00000300862 GOLT1AQ6ZVE7 132 aa10.21□□□□□ -0.77
HIF3A-204ENST00000300862 PRNTQ86SH4 94 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.78
HIF3A-204ENST00000300862 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.78
HIF3A-204ENST00000300862 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.78
HIF3A-204ENST00000300862 NCOR2Q9Y618 2525 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 CHD8Q9HCK8 2581 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 IGHV2-70DA0A0C4DH43 119 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 K7EIM0 57 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 M0R2Z0 102 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 LTAP01374 205 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 P01737 135 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 LIPFP07098 398 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 HES1Q14469 280 aa10.21□□□□□ -0.78
HIF3A-204ENST00000300862 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.78
HIF3A-204ENST00000300862 HTR1DP28221 377 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 PLP1P60201 277 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 FMC1Q96HJ9 113 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 RNF24Q9Y225 148 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 SH2D7A6NKC9 451 aaPredicted RBP10.2□□□□□ -0.78
HIF3A-204ENST00000300862 CA7P43166 264 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 KLF5Q13887 457 aaPredicted RBP10.2□□□□□ -0.78
HIF3A-204ENST00000300862 ODF1Q14990 250 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
HIF3A-204ENST00000300862 URB1-AS1Q96HZ7 61 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 CLEC5AQ9NY25 188 aa10.2□□□□□ -0.78
HIF3A-204ENST00000300862 SPTAN1Q13813 2472 aaKnown RBP10.19□□□□□ -0.78
HIF3A-204ENST00000300862 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
HIF3A-204ENST00000300862 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms