RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 IGHG3P01860 377 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 FAM106CPP0CH98 169 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 COX8AP10176 69 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 IGHV1-2P23083 117 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 FAM106AQ4KMX7 169 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 FAM216BQ8N7L0 139 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 C1RLQ9NZP8 487 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 DLL1O00548 723 aa12.01□□□□□ -0.49
SPIDR-201ENST00000297423 GTSF1Q8WW33 167 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 TGFAP01135 160 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 PPIFP30405 207 aaKnown RBP12□□□□□ -0.49
SPIDR-201ENST00000297423 ARL3P36405 182 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 PROCRQ9UNN8 238 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
SPIDR-201ENST00000297423 J3QW42 95 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 CKS2P33552 79 aa12□□□□□ -0.49
SPIDR-201ENST00000297423 ZNF71Q9NQZ8 489 aaPredicted RBP12□□□□□ -0.49
SPIDR-201ENST00000297423 K7EP34 96 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 UPK2O00526 184 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 IGKV1D-17A0A075B6S4 117 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 D6R8Y8 96 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
SPIDR-201ENST00000297423 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
SPIDR-201ENST00000297423 TLN2Q9Y4G6 2542 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 PRCDQ00LT1 54 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 TMEM160Q9NX00 188 aa11.99□□□□□ -0.49
SPIDR-201ENST00000297423 G3V4G9 280 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 C15orf65H3BRN8 121 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 K7EQM0 130 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 CEACAM4O75871 244 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 CECR9P0C854 216 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
SPIDR-201ENST00000297423 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 DMDP11532 3685 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 CCL8P80075 99 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 LOXL1Q08397 574 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-201ENST00000297423 HSD52Q0P140 79 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 TWIST1Q15672 202 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 TLN1Q9Y490 2541 aaKnown RBP11.98□□□□□ -0.49
SPIDR-201ENST00000297423 RNASE2P10153 161 aaKnown RBP11.98□□□□□ -0.49
SPIDR-201ENST00000297423 CKS1BP61024 79 aa11.98□□□□□ -0.49
SPIDR-201ENST00000297423 MBNL2Q5VZF2 373 aaKnown RBP11.98□□□□□ -0.49
SPIDR-201ENST00000297423 NCOR2Q9Y618 2525 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 CCL3L1P16619 93 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 FCGR2BP31994 310 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-201ENST00000297423 RBPJQ06330 500 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 KLF5Q13887 457 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-201ENST00000297423 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 FOXA2Q9Y261 457 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-201ENST00000297423 MALRD1Q5VYJ5 2156 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 ACACBO00763 2458 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 A0A1B0GWB2 263 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 PRSS46E5RG02 174 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 SS18L1O75177 396 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-201ENST00000297423 MBD6Q96DN6 1003 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 ABHD17AQ96GS6 310 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 TRGV8A0A0C4DH27 118 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 CNIH1O95406 144 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 KLK15Q9H2R5 256 aa11.97□□□□□ -0.49
SPIDR-201ENST00000297423 TMEM213A2RRL7 107 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 IGFL3Q6UXB1 125 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 Q6ZS92 163 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 ATP5L2Q7Z4Y8 100 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 C9orf106Q8NAJ2 232 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 IGHV3-35A0A0C4DH35 117 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 A0A1W2PPM0 123 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 H3BRM9 83 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 EVI2AP22794 236 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 SPRNQ5BIV9 151 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 ARPC1AQ92747 370 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 C19orf24Q9BVV8 132 aa11.96□□□□□ -0.49
SPIDR-201ENST00000297423 SORL1Q92673 2214 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 RAB9AP51151 201 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 TMPRSS3P57727 454 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 NPFFR1Q9GZQ6 430 aa11.96□□□□□ -0.5
SPIDR-201ENST00000297423 H3BMG7 143 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-201ENST00000297423 FAM167A-AS1Q96KT0 104 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 E7EUB6 86 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 PRRG2O14669 202 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 SMAD7O15105 426 aaKnown RBP11.95□□□□□ -0.5
SPIDR-201ENST00000297423 WFDC2Q14508 124 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 ZNF747Q9BV97 191 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 M0R3E3 92 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 ORM1P02763 201 aa11.95□□□□□ -0.5
SPIDR-201ENST00000297423 DLX1P56177 255 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms