RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 A0A1W2PPV4 95 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
CCDC140-201ENST00000295226 FAM209BQ5JX69 171 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 DLX4Q92988 240 aaPredicted RBP11.59□□□□□ -0.55
CCDC140-201ENST00000295226 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 TOMM40O96008 361 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 LINC00869P0C866 280 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 EDN2P20800 178 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 RPL29P47914 159 aaKnown RBP11.59□□□□□ -0.55
CCDC140-201ENST00000295226 CEBPGP53567 150 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 RAB5BP61020 215 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 FAM90A2PQ658T7 463 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 SHISA2Q6UWI4 295 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 SPATA3Q8NHX4 192 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 Q8WTZ3 238 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 TMEM242Q9NWH2 141 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 DOK5Q9P104 306 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 PXMP4Q9Y6I8 212 aa11.59□□□□□ -0.55
CCDC140-201ENST00000295226 IL4P05112 153 aa11.58□□□□□ -0.56
CCDC140-201ENST00000295226 LYZP61626 148 aa11.58□□□□□ -0.56
CCDC140-201ENST00000295226 RELQ04864 619 aaPredicted RBP11.58□□□□□ -0.56
CCDC140-201ENST00000295226 KLF5Q13887 457 aaPredicted RBP11.58□□□□□ -0.56
CCDC140-201ENST00000295226 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
CCDC140-201ENST00000295226 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
CCDC140-201ENST00000295226 SELENOKQ9Y6D0 94 aa11.58□□□□□ -0.56
CCDC140-201ENST00000295226 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 SCGB2A1O75556 95 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 ORM2P19652 201 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 FHL3Q13643 280 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 GCSAMLQ5JQS6 135 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 CTDSP1Q9GZU7 261 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
CCDC140-201ENST00000295226 NDUFA4O00483 81 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 MYCNOSP40205 109 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 AKR1C3P42330 323 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 B2MP61769 119 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 PRR20EP86478 221 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 PRR20CP86479 221 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 PRR20DP86480 221 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 PRR20BP86481 221 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 PRR20AP86496 221 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 USF2Q15853 346 aaPredicted RBP11.56□□□□□ -0.56
CCDC140-201ENST00000295226 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 OR1B1Q8NGR6 318 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 BIN3Q9NQY0 253 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
CCDC140-201ENST00000295226 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 WI2-2373I1.2A0A1W2PRP0 233 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 ZNF727A8MUV8 499 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 PDE6DO43924 150 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 CXorf1O96002 111 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 PF4P02776 101 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 CD81P60033 236 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 RHOBP62745 196 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 SDF2L1Q9HCN8 221 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 ANK2Q01484 3957 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 F6UZH7 168 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 EIF3GO75821 320 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC140-201ENST00000295226 APOHP02749 345 aaPredicted RBP11.55□□□□□ -0.56
CCDC140-201ENST00000295226 FABP1P07148 127 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 STAG3L2P0CL84 134 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 STAG3L3P0CL85 134 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 RAB5AP20339 215 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 SELENOTP62341 195 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 PATE2Q6UY27 113 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
CCDC140-201ENST00000295226 IGHV3-66A0A0C4DH42 116 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 OR5G3P0C626 314 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 TMEM241Q24JQ0 296 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 C1QL4Q86Z23 238 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 UHRF2Q96PU4 802 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 SMIM7Q9BQ49 75 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
CCDC140-201ENST00000295226 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
CCDC140-201ENST00000295226 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
CCDC140-201ENST00000295226 TMEM213A2RRL7 107 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 C11orf94C9JXX5 98 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 OVOL1O14753 267 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 HYPMO75409 117 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 MORN5Q5VZ52 161 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 REC114Q7Z4M0 266 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 FAM24BQ8N5W8 94 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 LINC00482Q8N8I6 264 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 ISOC2Q96AB3 205 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 RNF2Q99496 336 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.56
CCDC140-201ENST00000295226 LGALS9O00182 355 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms