RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
TFF1-201ENST00000291527 CARHSP1Q9Y2V2 147 aaKnown RBP6.43□□□□□ -1.38
TFF1-201ENST00000291527 KIR2DL5BA0A0G2JN68 375 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 KIR2DL5BA0A0G2JPC4 375 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 IGSF23A1L1A6 192 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 C15orf61A6NNL5 157 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 C15orf62A8K5M9 175 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 C17orf112F2Z3M2 114 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 F8W036 122 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 UBE2CO00762 179 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 MPDU1O75352 247 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 YIF1AO95070 293 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 IGKV1-5P01602 117 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 APOC3P02656 99 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 P0C879 139 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 RBMY1A1P0DJD3 496 aaKnown RBP6.42□□□□□ -1.38
TFF1-201ENST00000291527 RBMY1CP0DJD4 496 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 SPCS3P61009 180 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 NHLH2Q02577 135 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 RBMY1FQ15415 496 aaKnown RBP6.42□□□□□ -1.38
TFF1-201ENST00000291527 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 TCF24Q7RTU0 167 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 KIR2DL5AQ8N109 375 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 OR10P1Q8NGE3 313 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 OR11H2Q8NH07 326 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 KIR2DL5BQ8NHK3 375 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 PCNPQ8WW12 178 aaKnown RBP6.42□□□□□ -1.38
TFF1-201ENST00000291527 RARRES2Q99969 163 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 SCRT1Q9BWW7 348 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 MAGT1Q9H0U3 335 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 CSTL1Q9H114 145 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 HRH4Q9H3N8 390 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 UQCC1Q9NVA1 299 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 THYN1Q9P016 225 aa6.42□□□□□ -1.38
TFF1-201ENST00000291527 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 OR4C46A6NHA9 309 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 IFNA1P01562 189 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 ATP6V0CP27449 155 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 MFAP4P55083 255 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 PAX9P55771 341 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 DEFB131AP59861 70 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 RAB11AP62491 216 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 CLINT1Q14677 625 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 C10orf91Q5T1B1 145 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 ZNF709Q8N972 641 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 OR1P1Q8NH06 330 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 DTD1Q8TEA8 209 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 LINC00052Q96N35 136 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 TMEM147Q9BVK8 224 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 FNDC4Q9H6D8 234 aaPredicted RBP6.41□□□□□ -1.38
TFF1-201ENST00000291527 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 PRNDQ9UKY0 176 aa6.41□□□□□ -1.38
TFF1-201ENST00000291527 HSPG2P98160 4391 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 MUC4Q99102 2169 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 CEBPZOSA8MTT3 80 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 TMEM50AO95807 157 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 CD5P06127 495 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 SNCAP37840 140 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 PPT1P50897 306 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 PRCDQ00LT1 54 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 Q6ZRM9 215 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 Q8NAQ8 132 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.38
TFF1-201ENST00000291527 RBKSQ9H477 322 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 VSIRQ9H7M9 311 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 CLEC5AQ9NY25 188 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 APLNQ9ULZ1 77 aa6.4□□□□□ -1.38
TFF1-201ENST00000291527 KLK5Q9Y337 293 aaPredicted RBP6.4□□□□□ -1.38
TFF1-201ENST00000291527 PUS1Q9Y606 427 aaKnown RBP eCLIP6.4□□□□□ -1.38
TFF1-201ENST00000291527 ELOA3CA0A087WX78 387 aaPredicted RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 CST7O76096 145 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 CA1P00915 261 aaPredicted RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 IFNA17P01571 189 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 RNASE2P10153 161 aaKnown RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 DEFB1P60022 68 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 HSPE1P61604 102 aaKnown RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 SLC38A11Q08AI6 406 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 RAB31Q13636 194 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 GUK1Q16774 197 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 PVRIGQ6DKI7 326 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 TMEM182Q6ZP80 229 aaPredicted RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 TMEM217Q8N7C4 229 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 OR10G4Q8NGN3 311 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 C11orf45Q8TAV5 145 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 FAM213BQ8TBF2 198 aa6.39□□□□□ -1.39
TFF1-201ENST00000291527 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
TFF1-201ENST00000291527 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms