RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 ATOH7Q8N100 152 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 DYNAPQ8N1N2 210 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 SMIM12Q96EX1 92 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 MSRB2Q9Y3D2 182 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 MED13LQ71F56 2210 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 LOC105371242A0A075B767 164 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 M0QZ24 198 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 IL4P05112 153 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 LCN12Q6JVE5 192 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 RNASEKQ6P5S7 137 aaKnown RBP17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 TMEM14CQ9P0S9 112 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 A8MWL6 223 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 ZNF491Q8N8L2 437 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 TIMD4Q96H15 378 aa17.11■□□□□ 0.33
PAXBP1-201ENST00000290178 HBBP68871 147 aa17.1■□□□□ 0.33
PAXBP1-201ENST00000290178 ZNF785A8K8V0 405 aa17.1■□□□□ 0.33
PAXBP1-201ENST00000290178 HSBP1O75506 76 aa17.1■□□□□ 0.33
PAXBP1-201ENST00000290178 OR2J3O76001 311 aa17.1■□□□□ 0.33
PAXBP1-201ENST00000290178 SHANK2-AS3Q9BTD1 123 aa17.1■□□□□ 0.33
PAXBP1-201ENST00000290178 COL8A1P27658 744 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 FCGR2BP31994 310 aaPredicted RBP17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 ATP5L2Q7Z4Y8 100 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 BORCS7Q96B45 105 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 ZNF492Q9P255 531 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 TRBV19A0A075B6N1 114 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 SSTP61278 116 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 KLF5Q13887 457 aaPredicted RBP17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 RNF125Q96EQ8 232 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 URB1-AS1Q96HZ7 61 aa17.09■□□□□ 0.33
PAXBP1-201ENST00000290178 SH2D7A6NKC9 451 aaPredicted RBP17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 IGHV3-23P01764 117 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 PMCHL1Q16048 86 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 MAJINQ3KP22 176 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 SPATA45Q537H7 98 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 C11orf71Q6IPW1 123 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 BPIFA4PQ86YQ2 179 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 NPBQ8NG41 125 aa17.08■□□□□ 0.33
PAXBP1-201ENST00000290178 NCBP2LA6PVI3 153 aaKnown RBP17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 H3BRN7 92 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 M0R2Z0 102 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 TCAPO15273 167 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 NDUFS7O75251 213 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 NDUFA3O95167 84 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 NDPQ00604 133 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 KLRB1Q12918 225 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 C5orf64Q2M2E5 130 aa17.08■□□□□ 0.32
PAXBP1-201ENST00000290178 ODF3BA8MYP8 253 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 FANCD2OSQ96PS1 177 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 SRSF8Q9BRL6 282 aaKnown RBP17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 M0R3E3 92 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 IGLC2P0DOY2 106 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 PRTN3P24158 256 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 CEACAM3P40198 252 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 CTRLP40313 264 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 EBLN2Q6P2I7 272 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 ZC2HC1AQ96GY0 325 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 WNK2Q9Y3S1 2297 aa17.07■□□□□ 0.32
PAXBP1-201ENST00000290178 SIGLEC15Q6ZMC9 328 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 OR4F17Q8NGA8 305 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 OR4B1Q8NGF8 309 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 A0A1W2PPR1 153 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 GNG7O60262 68 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 BATFQ16520 125 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 CT83Q5H943 113 aa17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 RBPMS2Q6ZRY4 209 aaKnown RBP17.06■□□□□ 0.32
PAXBP1-201ENST00000290178 FAM181BA6NEQ2 426 aa17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 HLA-DRB1P01911 266 aa17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 ZFP36P26651 326 aaKnown RBP17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 VMO1Q7Z5L0 202 aa17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 M0R1W7 72 aa17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 HOXB4P17483 251 aaPredicted RBP17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 SPTBN1Q01082 2364 aaKnown RBP17.05■□□□□ 0.32
PAXBP1-201ENST00000290178 NPIPB6E9PJ23 425 aa17.04■□□□□ 0.32
PAXBP1-201ENST00000290178 CLEC5AQ9NY25 188 aa17.04■□□□□ 0.32
PAXBP1-201ENST00000290178 MRPS12O15235 138 aaKnown RBP17.04■□□□□ 0.32
PAXBP1-201ENST00000290178 G0S2P27469 103 aa17.04■□□□□ 0.32
PAXBP1-201ENST00000290178 ZNF414Q96IQ9 312 aa17.04■□□□□ 0.32
PAXBP1-201ENST00000290178 WI2-2373I1.2A0A1W2PRP0 233 aa17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 F8W735 103 aaPredicted RBP17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 IGLV11-55A0A075B6I3 123 aa17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 Q56UQ5 140 aa17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 SPATA12Q7Z6I5 190 aa17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 ARPC1AQ92747 370 aa17.03■□□□□ 0.32
PAXBP1-201ENST00000290178 OVOL3O00110 214 aa17.02■□□□□ 0.32
PAXBP1-201ENST00000290178 GFRA4Q9GZZ7 299 aa17.02■□□□□ 0.32
PAXBP1-201ENST00000290178 PSG8Q9UQ74 426 aa17.02■□□□□ 0.32
PAXBP1-201ENST00000290178 CRIP1P50238 77 aa17.02■□□□□ 0.31
PAXBP1-201ENST00000290178 ZNF138P52744 262 aa17.02■□□□□ 0.31
PAXBP1-201ENST00000290178 ZNF562Q6V9R5 426 aa17.02■□□□□ 0.31
PAXBP1-201ENST00000290178 SPTBN4Q9H254 2564 aa17.02■□□□□ 0.31
PAXBP1-201ENST00000290178 NDUFB8O95169 186 aa17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 NEU4Q8WWR8 484 aaPredicted RBP17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 IGHV3OR16-8A0A075B7F1 116 aa17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 C2orf70A6NJV1 201 aa17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 CHEK1O14757 476 aa17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 APOHP02749 345 aaPredicted RBP17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 C8orf49Q96NF6 230 aa17.01■□□□□ 0.31
PAXBP1-201ENST00000290178 OR2T8A6NH00 312 aa17■□□□□ 0.31
PAXBP1-201ENST00000290178 MFAP4P55083 255 aa17■□□□□ 0.31
PAXBP1-201ENST00000290178 PSG3Q16557 428 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms