RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 THYN1Q9P016 225 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 DSCAMO60469 2012 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 TMEM200BQ69YZ2 307 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 PATE2Q6UY27 113 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 ST20Q9HBF5 79 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 NDUFA4L2Q9NRX3 87 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 A1L4Q6 167 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 NCBP2LA6PVI3 153 aaKnown RBP10.79□□□□□ -0.68
SCAF4-201ENST00000286835 GNG7O60262 68 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 IGHG3P01860 377 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 CTRLP40313 264 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 ATP5IP56385 69 aaPredicted RBP10.79□□□□□ -0.68
SCAF4-201ENST00000286835 EPG5Q9HCE0 2579 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 C7orf71A4D174 169 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 H3BUT2 72 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 TM4SF5O14894 197 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 ORM1P02763 201 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 IL4P05112 153 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 SONP18583 2426 aaKnown RBP10.79□□□□□ -0.68
SCAF4-201ENST00000286835 CNTFRP26992 372 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 LYPD2Q6UXB3 125 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 ZNF788Q6ZQV5 615 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 FMC1Q96HJ9 113 aa10.79□□□□□ -0.68
SCAF4-201ENST00000286835 LYNX1G3V0Z9 82 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 IGHV3-23P01764 117 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 LYNX1P0DP58 116 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 Q8N976 141 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.78□□□□□ -0.68
SCAF4-201ENST00000286835 TWIST1Q15672 202 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 IGLC7A0M8Q6 106 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 M0R3E3 92 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 MC5RP33032 325 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 CKS2P33552 79 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
SCAF4-201ENST00000286835 K7ENP7 123 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 GCSHP23434 173 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 RASL11AQ6T310 242 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 ATP5L2Q7Z4Y8 100 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 SPRY4Q9C004 299 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 PEF1Q9UBV8 284 aaKnown RBP10.77□□□□□ -0.68
SCAF4-201ENST00000286835 TLN2Q9Y4G6 2542 aa10.77□□□□□ -0.68
SCAF4-201ENST00000286835 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 TMEM189A5PLL7 270 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 CACNG7P62955 275 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 SCGB2A2Q13296 93 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 A0A0G2JNJ9 132 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 A6NDN8 102 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 IGLV1-44P01699 117 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 KLF17Q5JT82 389 aaPredicted RBP10.77□□□□□ -0.69
SCAF4-201ENST00000286835 LINC00322Q6ZN03 302 aaPredicted RBP10.77□□□□□ -0.69
SCAF4-201ENST00000286835 Q9UFV3 132 aa10.77□□□□□ -0.69
SCAF4-201ENST00000286835 TMEM167AQ8TBQ9 72 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 NAV2Q8IVL1 2488 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 OR2J3O76001 311 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
SCAF4-201ENST00000286835 CST9LQ9H4G1 147 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 COL6A3P12111 3177 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 CGB1A6NKQ9 187 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 C17orf100A8MU93 164 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 PSG9Q00887 426 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 RITA1Q96K30 269 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 MEGF9Q9H1U4 602 aa10.76□□□□□ -0.69
SCAF4-201ENST00000286835 GAGE12BA1L429 117 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 J3KRW8 73 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 CFHR2P36980 270 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 GUSBP1Q15486 140 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 FAM231DQ6ZW35 169 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 PRELID3AQ96N28 172 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 NCR2O95944 276 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 LGALS7P47929 136 aa10.75□□□□□ -0.69
SCAF4-201ENST00000286835 IFI27P40305 119 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 IGFBPL1Q8WX77 278 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 VKORC1Q9BQB6 163 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 MBD3L4A6NDZ8 208 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 MBD3L3A6NE82 208 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 MBD3L5A6NJ08 208 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 D6R8Y8 96 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 HIST1H1AQ02539 215 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 MBD3L2Q8NHZ7 208 aaPredicted RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 ZNF785A8K8V0 405 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
SCAF4-201ENST00000286835 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 SPATA12Q7Z6I5 190 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 C8orf46Q8TAG6 207 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
SCAF4-201ENST00000286835 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms