RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NPIPB3Q92617 1050 aa14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 FNDC4Q9H6D8 234 aaPredicted RBP14.58□□□□□ -0.08
PDLIM3-201ENST00000284767 VWC2LB2RUY7 222 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 CORTO00230 105 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 CHCHD1Q96BP2 118 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 URB1-AS1Q96HZ7 61 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 MAP1AP78559 2803 aaPredicted RBP14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 A0A1W2PRD5 423 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 A0A1W2PRF3 423 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 A0A1W2PRM7 423 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 CGB1A6NKQ9 187 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 BUB1B-PAK6H3BSN5 160 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 KLRD1Q13241 179 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 GPR82Q96P67 336 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 RPP21Q9H633 154 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 ST20Q9HBF5 79 aa14.57□□□□□ -0.08
PDLIM3-201ENST00000284767 TMEM8BA6NDV4 472 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 K7EP13 123 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 PRB1P04280 392 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 GNG5P63218 68 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 WT1-ASQ06250 92 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 FAM71F2Q6NXP2 309 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 LINC00305Q7Z4B0 112 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 LY6G5BQ8NDX9 201 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 SLC25A5P05141 298 aaKnown RBP14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 LIPFP07098 398 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 APELAP0DMC3 54 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 FAM120AOSQ5T036 256 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 C8orf46Q8TAG6 207 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 PERPQ96FX8 193 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 MLST8Q9BVC4 326 aa14.56□□□□□ -0.08
PDLIM3-201ENST00000284767 IGHV1-3A0A0C4DH29 117 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 A8MWL6 223 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 C21orf62-AS1Q17RA5 79 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 MRGPRG-AS1Q2M3A8 158 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 SPATA12Q7Z6I5 190 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 KIR3DL3Q8N743 410 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 PRSS22Q9GZN4 317 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 OR4C46A6NHA9 309 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 ZNF492Q9P255 531 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 INSIG2Q9Y5U4 225 aa14.55□□□□□ -0.08
PDLIM3-201ENST00000284767 SPG11Q96JI7 2443 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 CLEC5AQ9NY25 188 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 CSMD2Q7Z408 3487 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 IGHV2-70DA0A0C4DH43 119 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 IGHV3-48P01763 117 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 ZFP36P26651 326 aaKnown RBP14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 Q6ZVH6 145 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 RNASE8Q8TDE3 154 aaKnown RBP14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 FMC1Q96HJ9 113 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 GFRA4Q9GZZ7 299 aa14.54□□□□□ -0.08
PDLIM3-201ENST00000284767 LOC105371242A0A075B767 164 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 RBX1P62877 108 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 FBLN7Q53RD9 439 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 TCF24Q7RTU0 167 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 DOPEY1Q5JWR5 2465 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 PGPA6NDG6 321 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 SYS1-DBNDD2H3BUS1 97 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 MOSP00540 346 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 CD24P25063 80 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 MC5RP33032 325 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 LHFPL4Q7Z7J7 247 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 RPEQ96AT9 228 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 ZFHX3Q15911 3703 aa14.53□□□□□ -0.08
PDLIM3-201ENST00000284767 ZNF462Q96JM2 2506 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 IGHV1-24A0A0C4DH33 117 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 C19orf71A6NCJ1 209 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 P01737 135 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 ETFRF1Q6IPR1 90 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 C22orf15Q8WYQ4 148 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 TNFRSF14Q92956 283 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 HILPDAQ9Y5L2 63 aa14.52□□□□□ -0.08
PDLIM3-201ENST00000284767 LTAP01374 205 aa14.52□□□□□ -0.09
PDLIM3-201ENST00000284767 C5orf17Q8NAS9 161 aa14.52□□□□□ -0.09
PDLIM3-201ENST00000284767 BLNKQ8WV28 456 aa14.52□□□□□ -0.09
PDLIM3-201ENST00000284767 MRPL36Q9P0J6 103 aaKnown RBP14.52□□□□□ -0.09
PDLIM3-201ENST00000284767 EPG5Q9HCE0 2579 aa14.52□□□□□ -0.09
PDLIM3-201ENST00000284767 CELSR1Q9NYQ6 3014 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 FAM231BA6NCW3 169 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 LEPROTL1O95214 131 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 GTSF1Q8WW33 167 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 OR5AL1P0C617 328 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 NBEAP1P0C6P0 100 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 VMA21Q3ZAQ7 101 aa14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 RBPMS2Q6ZRY4 209 aaKnown RBP14.51□□□□□ -0.09
PDLIM3-201ENST00000284767 A0A1W2PPI3 338 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 LY6LH3BQJ8 138 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 ORM2P19652 201 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 HCP5Q6MZN7 132 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 LINC00322Q6ZN03 302 aaPredicted RBP14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 TRGV9Q99603 122 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 TMEM191AQ9H0A3 160 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 ABCA1O95477 2261 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 TRAV30A0A087WSZ9 112 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 SH2D7A6NKC9 451 aaPredicted RBP14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 RBP4P02753 201 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 CRYGCP07315 174 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 FOXA3P55318 350 aaPredicted RBP14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 SGK494Q96LW2 274 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms