RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TRBV6-7A0A0A0MS04 114 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 LINC00477Q96M19 166 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 RCHY1Q96PM5 261 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 RAMP3O60896 148 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 MPZP25189 248 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 AGRNO00468 2067 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 SMIM10L1P0DMW3 83 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 SPSB3Q6PJ21 355 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 SMIM10Q96HG1 83 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 SPSB2Q99619 263 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
SRRM4-201ENST00000267260 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 COLCA2A8K830 154 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 CECR9P0C854 216 aa10.05□□□□□ -0.8
SRRM4-201ENST00000267260 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
SRRM4-201ENST00000267260 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 CXCL1P09341 107 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 C17orf100A8MU93 164 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
SRRM4-201ENST00000267260 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 CEACAM8P31997 349 aaPredicted RBP10.04□□□□□ -0.8
SRRM4-201ENST00000267260 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 NRTNQ99748 197 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
SRRM4-201ENST00000267260 IGFBP3P17936 291 aaPredicted RBP10.04□□□□□ -0.8
SRRM4-201ENST00000267260 RNF126Q9BV68 326 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
SRRM4-201ENST00000267260 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 A0A1W2PRX2 142 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GAGE7O76087 117 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 TRGV9Q99603 122 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 RPUSD1Q9UJJ7 312 aaKnown RBP10.03□□□□□ -0.8
SRRM4-201ENST00000267260 FGF16O43320 207 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 MMP23AO75900 390 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 IGHG4P01861 327 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 WNT2P09544 360 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 TCF15Q12870 199 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 CDCP2Q5VXM1 449 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 MBNL3Q9NUK0 354 aaKnown RBP10.03□□□□□ -0.8
SRRM4-201ENST00000267260 LSM4Q9Y4Z0 139 aaKnown RBP10.03□□□□□ -0.8
SRRM4-201ENST00000267260 LY96Q9Y6Y9 160 aa10.03□□□□□ -0.8
SRRM4-201ENST00000267260 A0A1B0GTI1 187 aa10.02□□□□□ -0.8
SRRM4-201ENST00000267260 ZNF138P52744 262 aa10.02□□□□□ -0.8
SRRM4-201ENST00000267260 TFF2Q03403 129 aa10.02□□□□□ -0.8
SRRM4-201ENST00000267260 SELENOKQ9Y6D0 94 aa10.02□□□□□ -0.8
SRRM4-201ENST00000267260 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.81
SRRM4-201ENST00000267260 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 ADAMTS9Q9P2N4 1935 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 PYYP10082 97 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 HAMPP81172 84 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 FAM231BA6NCW3 169 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 ZNF876PQ49A33 203 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 SLAQ13239 276 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 NUP35Q8NFH5 326 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 IMMP1LQ96LU5 166 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
SRRM4-201ENST00000267260 C1QL2Q7Z5L3 287 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 A8MWP6 167 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 PATE3B3GLJ2 98 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 TCRAP04437 139 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 DEPPQ9NTK1 212 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 AZU1P20160 251 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 RNASE6Q93091 150 aaKnown RBP10.01□□□□□ -0.81
SRRM4-201ENST00000267260 DSCR9P59020 149 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 SAP25Q8TEE9 199 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 ADAMTS7Q9UKP4 1686 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 GREM1O60565 184 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 ZNF106Q9H2Y7 1883 aaKnown RBP10.01□□□□□ -0.81
SRRM4-201ENST00000267260 IGHV3OR16-8A0A075B7F1 116 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 K7EP13 123 aa10.01□□□□□ -0.81
SRRM4-201ENST00000267260 CD55P08174 381 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 GFRA4Q9GZZ7 299 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
SRRM4-201ENST00000267260 SLC25A28Q96A46 364 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 ZNF664Q8N3J9 261 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 SLC25A45Q8N413 288 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 CHCHD2Q9Y6H1 151 aaPredicted RBP10□□□□□ -0.81
SRRM4-201ENST00000267260 LOC101059948A0A1B0GTJ6 334 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 LCN12Q6JVE5 192 aa10□□□□□ -0.81
SRRM4-201ENST00000267260 SPXQ9BT56 116 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms