RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 NEU1Q99519 415 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
CPSF6-201ENST00000266679 ZNF586Q9NXT0 402 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
CPSF6-201ENST00000266679 TOMM40O96008 361 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 SLAQ13239 276 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 GDF5OSQ5U4N7 250 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 FMC1Q96HJ9 113 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 GPR82Q96P67 336 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 CHRDL1Q9BU40 450 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 ZNF253O75346 499 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 NDUFA3O95167 84 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 COX6B1P14854 86 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 PMCHP20382 165 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 PRTN3P24158 256 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 BRS3P32247 399 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 OR10J3Q5JRS4 329 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
CPSF6-201ENST00000266679 VMO1Q7Z5L0 202 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 NDUFAF3Q9BU61 184 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 OTORQ9NRC9 128 aa10.19□□□□□ -0.78
CPSF6-201ENST00000266679 A6NNC1 897 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 PRR31Q5SQ13 230 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 DYNAPQ8N1N2 210 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 SIGLECL1Q8N7X8 197 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 NPBQ8NG41 125 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 WIPF2Q8TF74 440 aaPredicted RBP10.18□□□□□ -0.78
CPSF6-201ENST00000266679 RPP21Q9H633 154 aaKnown RBP10.18□□□□□ -0.78
CPSF6-201ENST00000266679 MRPL27Q9P0M9 148 aaKnown RBP10.18□□□□□ -0.78
CPSF6-201ENST00000266679 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 AKAP6Q13023 2319 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 LTAP01374 205 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 C5orf64Q2M2E5 130 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 Q86TA4 180 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 MLST8Q9BVC4 326 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
CPSF6-201ENST00000266679 A0A1W2PPR1 153 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 NDUFS7O75251 213 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 GPR6P46095 362 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 AMTP48728 403 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 CAMPP49913 170 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 KRTAP10-9P60411 292 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 SSBP4Q9BWG4 385 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 TBL2Q9Y4P3 447 aaKnown RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 KIR2DL5BA0A0G2JN68 375 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 KIR2DL5BA0A0G2JPC4 375 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 A0A1W2PS18 150 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 H3BRN7 92 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 GPX1P07203 203 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 HOXB4P17483 251 aaPredicted RBP10.17□□□□□ -0.78
CPSF6-201ENST00000266679 KRTDAPP60985 99 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 C1orf194Q5T5A4 169 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 RASL11AQ6T310 242 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 KIR2DL5AQ8N109 375 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 SHANK2-AS3Q9BTD1 123 aa10.17□□□□□ -0.78
CPSF6-201ENST00000266679 HIVEP1P15822 2718 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 F8P00451 2351 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 A0A1B0GV90 55 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 NCBP2LA6PVI3 153 aaKnown RBP10.16□□□□□ -0.78
CPSF6-201ENST00000266679 VWC2LB2RUY7 222 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 P01737 135 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 IL4P05112 153 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 ZFP36P26651 326 aaKnown RBP10.16□□□□□ -0.78
CPSF6-201ENST00000266679 NDPQ00604 133 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 PRNTQ86SH4 94 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 DTX2Q86UW9 622 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 VN1R17PQ8TDU5 208 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 RNF125Q96EQ8 232 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 C17orf77Q96MU5 243 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 UBTD1Q9HAC8 227 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 ZNF492Q9P255 531 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 ABCA1O95477 2261 aa10.16□□□□□ -0.78
CPSF6-201ENST00000266679 C19orf71A6NCJ1 209 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 HLA-DRB1P01911 266 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 CIARTQ8N365 385 aaPredicted RBP10.15□□□□□ -0.78
CPSF6-201ENST00000266679 KIR3DL3Q8N743 410 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 C18orf32Q8TCD1 76 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
CPSF6-201ENST00000266679 NRN1Q9NPD7 142 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 GNG7O60262 68 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 BPIFA4PQ86YQ2 179 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 OR4F17Q8NGA8 305 aa10.15□□□□□ -0.78
CPSF6-201ENST00000266679 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms