RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 NIT2Q9NQR4 276 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 FSTL3O95633 263 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 BLCAPP62952 87 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 A0A1W2PPR1 153 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 RAX2Q96IS3 184 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 IGHV7-81A0A0B4J1V7 117 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 TSPOP30536 169 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 PMS2P11Q13670 270 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 TCF24Q7RTU0 167 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 NPBQ8NG41 125 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 PSG8Q9UQ74 426 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 E7EUB6 86 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 IGLV2-23P01705 113 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 AMTP48728 403 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 ZNF726P1Q15940 193 aa11.47□□□□□ -0.57
PDLIM2-201ENST00000265810 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
PDLIM2-201ENST00000265810 LDLRAD2Q5SZI1 272 aa11.46□□□□□ -0.57
PDLIM2-201ENST00000265810 TSTD3H0UI37 97 aa11.46□□□□□ -0.57
PDLIM2-201ENST00000265810 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
PDLIM2-201ENST00000265810 A0A1B0GW64 132 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 IGLC1P0CG04 106 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 KIAA1644Q3SXP7 199 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 TOMM20LQ6UXN7 152 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 Q8N9W7 124 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.58
PDLIM2-201ENST00000265810 CD33P20138 364 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 SYNJ2BPP57105 145 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 SHANK2-AS3Q9BTD1 123 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 LAMA1P25391 3075 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 POLQO75417 2590 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 MUC21A0A0G2JKD1 596 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 MUC21A0A140T8X8 626 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 MUC21Q5SSG8 566 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 FAM159AQ6UWV7 190 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 C9JQL5 133 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 TMEM95Q3KNT9 176 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 M0R3E3 92 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 MT-ND6P03923 174 aa11.45□□□□□ -0.58
PDLIM2-201ENST00000265810 IL36BQ9NZH7 164 aa11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 MRPL18Q9H0U6 180 aaKnown RBP11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 GRIFINA4D1Z8 144 aa11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 HLA-DQA1P01909 254 aa11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 NEU1Q99519 415 aa11.44□□□□□ -0.58
PDLIM2-201ENST00000265810 TRAV8-1A0A0A6YYK1 113 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 TCRAP04437 139 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 CD99P14209 185 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 CBLN1P23435 193 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 WFDC12Q8WWY7 111 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 DAZ1Q9NQZ3 744 aaKnown RBP11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 PSMG4Q5JS54 123 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 CIARTQ8N365 385 aaPredicted RBP11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 A0A087WWC5 75 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 LOXL1Q08397 574 aaPredicted RBP11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 DYNAPQ8N1N2 210 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 RPP21Q9H633 154 aaKnown RBP11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 DOPEY1Q5JWR5 2465 aa11.43□□□□□ -0.58
PDLIM2-201ENST00000265810 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 PRR20EP86478 221 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 PRR20CP86479 221 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 PRR20DP86480 221 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 PRR20BP86481 221 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 PRR20AP86496 221 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 WFDC11Q8NEX6 87 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 LINC00479Q96M42 142 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 REV3LO60673 3130 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 P0C879 139 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 BATFQ16520 125 aa11.42□□□□□ -0.58
PDLIM2-201ENST00000265810 FABP5P3A8MUU1 101 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 CKS2P33552 79 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 LSM4Q9Y4Z0 139 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 LINC01551Q86U37 167 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 M0R2Z0 102 aa11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 NUTF2P61970 127 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-201ENST00000265810 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms