RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ATP6V0BQ99437 205 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 C20orf144Q9BQM9 153 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
MSH3-201ENST00000265081 A0A1W2PRD5 423 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 A0A1W2PRF3 423 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 A0A1W2PRM7 423 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 MFAP4P55083 255 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 PLGLAQ15195 96 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 CNIH1O95406 144 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 BRI3O95415 125 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 NIT1Q86X76 327 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 A0A087X0K7 114 aa8.71□□□□□ -1.01
MSH3-201ENST00000265081 PSG3Q16557 428 aa8.71□□□□□ -1.01
MSH3-201ENST00000265081 TLN1Q9Y490 2541 aaKnown RBP8.71□□□□□ -1.01
MSH3-201ENST00000265081 CTSGP08311 255 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 TCL1AP56279 114 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 DEFA6Q01524 100 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 C2orf88Q9BSF0 95 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.02
MSH3-201ENST00000265081 CYB5R2Q6BCY4 276 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 TOMM20LQ6UXN7 152 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 S100A7AQ86SG5 101 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 PLXNB1O43157 2135 aa8.71□□□□□ -1.02
MSH3-201ENST00000265081 A8MWL6 223 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZNF324O75467 553 aaPredicted RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 NDUFB8O95169 186 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 CDKN1AP38936 164 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 PAX8Q06710 450 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 MRPL54Q6P161 138 aaKnown RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZNF502Q8TBZ5 544 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 CEP295Q9C0D2 2601 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 FBLL1A6NHQ2 334 aaKnown RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 NDUFS7O75251 213 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 IGHG4P01861 327 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 SRIP30626 198 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 CTRLP40313 264 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 EXOC3-AS1Q8N2X6 119 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 FAM103A1Q9BTL3 118 aaKnown RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 TOX4O94842 621 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 HBBP68871 147 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 RBPMS2Q6ZRY4 209 aaKnown RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 Q71RC1 249 aaPredicted RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
MSH3-201ENST00000265081 SMAD5-AS1Q9Y6J3 95 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 TMEM11P17152 192 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 LY6DQ14210 128 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 OR4F17Q8NGA8 305 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 C21orf62Q9NYP8 219 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 C1RLQ9NZP8 487 aa8.7□□□□□ -1.02
MSH3-201ENST00000265081 IL4P05112 153 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 CRIP1P50238 77 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 HSPB9Q9BQS6 159 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 PRO1933Q9H354 126 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
MSH3-201ENST00000265081 TACC2O95359 2948 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 FAM106CPP0CH98 169 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 CD24P25063 80 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 SERTAD4Q9NUC0 356 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 P01737 135 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 SLC35B1P78383 322 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 KLF17Q5JT82 389 aaPredicted RBP8.69□□□□□ -1.02
MSH3-201ENST00000265081 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 LPAR2Q9HBW0 351 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 THYN1Q9P016 225 aa8.69□□□□□ -1.02
MSH3-201ENST00000265081 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 UQCRFS1P47985 274 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 PSG9Q00887 426 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 A0A1B0GW15 77 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 CRXO43186 299 aaPredicted RBP8.68□□□□□ -1.02
MSH3-201ENST00000265081 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
MSH3-201ENST00000265081 TMEM8BA6NDV4 472 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 GNG7O60262 68 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 IGHV4-39P01824 125 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 GOLT1AQ6ZVE7 132 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 PSG8Q9UQ74 426 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 SPINK4O60575 86 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 SAA4P35542 130 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 CIARTQ8N365 385 aaPredicted RBP8.67□□□□□ -1.02
MSH3-201ENST00000265081 PIFOQ8TCI5 191 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 UBTD1Q9HAC8 227 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 U3KQE9 123 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 NPFFO15130 113 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms