RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TMEM178BH3BS89 294 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
USP13-201ENST00000263966 GNG5P63218 68 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 TIMM21Q9BVV7 248 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 hADV29S1A0JD25 119 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 TCRAP04437 139 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 IGHV1-8P0DP01 117 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 MRAPQ8TCY5 172 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
USP13-201ENST00000263966 NUP210Q8TEM1 1887 aaPredicted RBP13.63□□□□□ -0.23
USP13-201ENST00000263966 BRD3OSQ6XYD6 125 aa13.63□□□□□ -0.23
USP13-201ENST00000263966 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
USP13-201ENST00000263966 RNASE7Q9H1E1 156 aaKnown RBP13.63□□□□□ -0.23
USP13-201ENST00000263966 IGLV3-19P01714 112 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 CSPG4Q6UVK1 2322 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
USP13-201ENST00000263966 KLF5Q13887 457 aaPredicted RBP13.62□□□□□ -0.23
USP13-201ENST00000263966 TAL2Q16559 108 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 A0A1W2PRE2 83 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 TMEM14DPA8MWL7 114 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 IGHV1-3A0A0C4DH29 117 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 LINC00271P0C7V0 271 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 SMIM2Q9BVW6 85 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 SIP14410 1827 aa13.62□□□□□ -0.23
USP13-201ENST00000263966 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
USP13-201ENST00000263966 MRPL14Q6P1L8 145 aaKnown RBP13.62□□□□□ -0.23
USP13-201ENST00000263966 ZNF474Q6S9Z5 364 aaPredicted RBP13.62□□□□□ -0.23
USP13-201ENST00000263966 DENND4CQ5VZ89 1909 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 TMEM200BQ69YZ2 307 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 CXCL2P19875 107 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 IGHG3P01860 377 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 IGKV2-40A0A087WW87 121 aaPredicted RBP13.61□□□□□ -0.23
USP13-201ENST00000263966 IGKV2D-40P01614 121 aaPredicted RBP13.61□□□□□ -0.23
USP13-201ENST00000263966 C2orf82Q6UX34 121 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 AMELYQ99218 206 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 RAMP3O60896 148 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 GAGE13Q4V321 117 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 SLC25A48Q6ZT89 311 aaKnown RBP13.61□□□□□ -0.23
USP13-201ENST00000263966 TRGV9Q99603 122 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
USP13-201ENST00000263966 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 PMS2P5A8MQ11 134 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 FAM19A2Q8N3H0 131 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
USP13-201ENST00000263966 IGLV3-21P80748 117 aaPredicted RBP13.6□□□□□ -0.23
USP13-201ENST00000263966 A0A0G2JNJ9 132 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 SAA4P35542 130 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
USP13-201ENST00000263966 LY6G5BQ8NDX9 201 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 Q9UFV3 132 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 RPUSD1Q9UJJ7 312 aaKnown RBP13.6□□□□□ -0.23
USP13-201ENST00000263966 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 RFNGQ9Y644 331 aa13.6□□□□□ -0.23
USP13-201ENST00000263966 BUB1B-PAK6H3BSN5 160 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 A8MXK9 166 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 RAMP1O60894 148 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 OSTCQ9NRP0 149 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 NDPQ00604 133 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 ZCCHC24Q8N2G6 241 aaKnown RBP13.59□□□□□ -0.23
USP13-201ENST00000263966 ZNF479Q96JC4 524 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 AZU1P20160 251 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 HEPN1Q6WQI6 88 aa13.59□□□□□ -0.23
USP13-201ENST00000263966 LMO1P25800 156 aa13.58□□□□□ -0.23
USP13-201ENST00000263966 MLNRO43193 412 aa13.58□□□□□ -0.23
USP13-201ENST00000263966 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.23
USP13-201ENST00000263966 MSRB2Q9Y3D2 182 aa13.58□□□□□ -0.23
USP13-201ENST00000263966 TRBV5-3A0A0A0MS03 114 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 COX11Q9Y6N1 276 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
USP13-201ENST00000263966 MUC6Q6W4X9 2439 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 GAGE2BQ13066 116 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 KLRD1Q13241 179 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 ZNF525Q8N782 197 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 ST6GALNAC6Q969X2 333 aa13.58□□□□□ -0.24
USP13-201ENST00000263966 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.24
USP13-201ENST00000263966 TRAV8-1A0A0A6YYK1 113 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 SOCS3O14543 225 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 PLSCR4Q9NRQ2 329 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 PLXNA4Q9HCM2 1894 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 PLA2G10O15496 165 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 KLK5Q9Y337 293 aaPredicted RBP13.57□□□□□ -0.24
USP13-201ENST00000263966 MBD3L4A6NDZ8 208 aaPredicted RBP13.57□□□□□ -0.24
USP13-201ENST00000263966 MBD3L3A6NE82 208 aaPredicted RBP13.57□□□□□ -0.24
USP13-201ENST00000263966 MBD3L5A6NJ08 208 aaPredicted RBP13.57□□□□□ -0.24
USP13-201ENST00000263966 F8VVB4 439 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 F8VWA3 439 aa13.57□□□□□ -0.24
USP13-201ENST00000263966 CHKB-CPT1BH3BT56 60 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms