RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FZR1Q9UM11 496 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 SERTM2A0A1B0GWG4 89 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 hADV38S2A0JD32 116 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 MAGEA5P43359 124 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 INO80CQ6PI98 192 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 PRNTQ86SH4 94 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 ZNRF1Q8ND25 227 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 CHAC1Q9BUX1 264 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 Q9H3A6 140 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 MRPL16Q9NX20 251 aaKnown RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 IGKV1D-17A0A075B6S4 117 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 D6R8Y8 96 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 HBDP02042 147 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 CCL4P13236 92 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 Q86TA4 180 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 PHLDA1Q8WV24 401 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-201ENST00000261443 FAM173AQ9BQD7 235 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF576Q9H609 170 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 DKK2Q9UBU2 259 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 IGKV1D-37A0A075B6S9 117 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 IGHV3OR15-7A0A075B7D8 119 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 E9PLD3 99 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 SAA1P0DJI8 122 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A10P0DMU9 189 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 KIR2DL2P43627 348 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-201ENST00000261443 INSL3P51460 131 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 ADGRG4Q8IZF6 3080 aa5.79□□□□□ -1.48
CSDE1-201ENST00000261443 A0A1B0GW15 77 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 WFDC3Q8IUB2 231 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF479Q96JC4 524 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 PRELID3AQ96N28 172 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 DUSP23Q9BVJ7 150 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 HES7Q9BYE0 225 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 TTTY13Q9BZ97 58 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 IGLL5B9A064 214 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 K7EMI3 77 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 OVOL3O00110 214 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 TMEM164Q5U3C3 297 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 AMTNQ6UX39 209 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 CEND1Q8N111 149 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 NDUFA4L2Q9NRX3 87 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 SSUH2Q9Y2M2 353 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 NBASA2RRP1 2371 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 IGKV2D-26A0A0A0MRZ7 120 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 NDUFS7O75251 213 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 C17orf58Q2M2W7 97 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 Q71RC1 249 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-201ENST00000261443 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 MRPL36Q9P0J6 103 aaKnown RBP5.78□□□□□ -1.48
CSDE1-201ENST00000261443 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
CSDE1-201ENST00000261443 SVEP1Q4LDE5 3571 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 K7ESF4 209 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 LYZL6O75951 148 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 CFAP161Q6P656 301 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 THAP8Q8NA92 274 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 ZNF502Q8TBZ5 544 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 ZNF418Q8TF45 676 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-201ENST00000261443 RND1Q92730 232 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 RAB9BQ9NP90 201 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 COLQQ9Y215 455 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-201ENST00000261443 TRBV25-1A0A075B6N4 114 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 E7EUB6 86 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 SPINK8P0C7L1 97 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 GP9P14770 177 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 SUB1P53999 127 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■■□□□ 13.8
CSDE1-201ENST00000261443 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 HARBI1Q96MB7 349 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 C20orf78Q9BR46 151 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 TTTY12Q9BZ98 90 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 COL12A1Q99715 3063 aa5.77□□□□□ -1.49
CSDE1-201ENST00000261443 A0A1B0GWB2 263 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 APOMO95445 188 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 ZCCHC24Q8N2G6 241 aaKnown RBP5.76□□□□□ -1.49
CSDE1-201ENST00000261443 TTC9CQ8N5M4 171 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 CYSLTR1Q9Y271 337 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 ARFGEF3Q5TH69 2177 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 TACC2O95359 2948 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 CSMD1Q96PZ7 3565 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 KALRNO60229 2985 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 RIF1Q5UIP0 2472 aaKnown RBP5.76□□□□□ -1.49
CSDE1-201ENST00000261443 CGB3P0DN86 165 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 CGB7P0DN87 165 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 WT1-ASQ06250 92 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 PSMG4Q5JS54 123 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 EXOC3-AS1Q8N2X6 119 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 PIFOQ8TCI5 191 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 ASCL2Q99929 193 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 OTORQ9NRC9 128 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 ZNRD1Q9P1U0 126 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 RELNP78509 3460 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 IGLV2-11P01706 119 aa5.76□□□□□ -1.49
CSDE1-201ENST00000261443 IGHV1-2P23083 117 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms