RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MAPK1IP1LQ8NDC0 245 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 PERPQ96FX8 193 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 PAXXQ9BUH6 204 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 TAS2R45P59539 299 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 TIGITQ495A1 244 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 TMEM219Q86XT9 240 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 ZNF503Q96F45 646 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 GGTLC3B5MD39 225 aa11.65□□□□□ -0.55
TRAFD1-201ENST00000257604 C3orf79P0CE67 100 aa11.65□□□□□ -0.55
TRAFD1-201ENST00000257604 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.55
TRAFD1-201ENST00000257604 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.55
TRAFD1-201ENST00000257604 IGHV3OR16-13A0A075B7E8 117 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 IGHV3-74A0A0B4J1X5 117 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 HYPMO75409 117 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 C11orf71Q6IPW1 123 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 RNASEKQ6P5S7 137 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 PATE2Q6UY27 113 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
TRAFD1-201ENST00000257604 RNF2Q99496 336 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 PMCHL2Q9BQD1 86 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 NDUFB8O95169 186 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 CEACAM3P40198 252 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 TMEM136Q6ZRR5 245 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 TCRBV4S1A1TA0A5B7 111 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 BMPR1BO00238 502 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 NBR2O15453 112 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 Q0VG73 95 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 SLAQ13239 276 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 ACANP16112 2415 aa11.63□□□□□ -0.55
TRAFD1-201ENST00000257604 OR2J3O76001 311 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 SLC25A5P05141 298 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 PSG1P11464 419 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 GAGE1Q13065 139 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 C20orf202A1L168 122 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 ESDP10768 282 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 RBX1P62877 108 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 KCNS1Q96KK3 526 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 ZFP30Q9Y2G7 519 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 CHD6Q8TD26 2715 aa11.62□□□□□ -0.55
TRAFD1-201ENST00000257604 PGPA6NDG6 321 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 CORTO00230 105 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 CCL25O15444 150 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 SNAI2O43623 268 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 CX3CL1P78423 397 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 TMEM167BQ9NRX6 74 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 CDC42EP3Q9UKI2 254 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 LAMTOR2Q9Y2Q5 125 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 ZNF324O75467 553 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 ZNF137PP52743 207 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 LY6EQ16553 131 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 TMEM249Q2WGJ8 235 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 NIT1Q86X76 327 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 BCL6BQ8N143 479 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 PRTN3P24158 256 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 COL8A1P27658 744 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 EFNA4P52798 201 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 ATP5J2P56134 94 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 TSKUQ8WUA8 353 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 TXNDC17Q9BRA2 123 aa11.61□□□□□ -0.55
TRAFD1-201ENST00000257604 MTORP42345 2549 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 TEX22C9J3V5 150 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 GOSR1O95249 250 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 LINC00614P0C842 121 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 CTRLP40313 264 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 SAA4P35542 130 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 NDPQ00604 133 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 OR4A5Q8NH83 315 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 TPPP3Q9BW30 176 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-201ENST00000257604 C9JCJ5 164 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 GNG7O60262 68 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 HSBP1O75506 76 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 APCSP02743 223 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 IL4P05112 153 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 ZNF138P52744 262 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 CCL19Q99731 98 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 OR2T8A6NH00 312 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms