RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 SPANXN1Q5VSR9 72 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF747Q9BV97 191 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 MGAMO43451 1857 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 AMELYQ99218 206 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 V9GYV3 84 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 H3BT86 120 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 PPP1R17O96001 155 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 PRB4P10163 310 aaPredicted RBP5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM201AQ5SY85 155 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 Q8N1Y9 231 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 WIPF2Q8TF74 440 aaPredicted RBP5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 IGHG3P01860 377 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 INSL3P51460 131 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 EMC6Q9BV81 110 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 AGPAT4-IT1Q9H0P7 198 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 CACNA1CQ13936 2221 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 RNASE1P07998 156 aaKnown RBP5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 FOXF1Q12946 379 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 CSRP2Q16527 193 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 PMS2CLQ68D20 193 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF818PQ6ZRF7 136 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 SLC22A18ASQ8N1D0 253 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 LY6G5BQ8NDX9 201 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 PRR19A6NJB7 356 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 CFC1BP0CG36 223 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 CFC1P0CG37 223 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
PDGFRA-201ENST00000257290 IFI6P09912 130 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 C10orf128Q5T292 105 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 SMIM27A0A1W2PRY6 76 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 CRYBA2P53672 197 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 TRAV40A0A0B4J280 105 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 A0A1W2PQD3 144 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 TMEM30CPA0ZSE6 113 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 J3QQQ9 107 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 MGPP08493 103 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 LOXL3P58215 753 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 CR1LQ2VPA4 569 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 LIME1Q9H400 295 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 ANK1P16157 1881 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 VWC2LB2RUY7 222 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 FOXE3Q13461 319 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 MORN5Q5VZ52 161 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 PRSS27Q9BQR3 290 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM60AQ9NP50 221 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 PDCD11Q14690 1871 aaKnown RBP5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 NGFP01138 241 aa5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 DSCR4P56555 118 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-201ENST00000257290 PRRG2O14669 202 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 TRBV19A0A075B6N1 114 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 C2orf70A6NJV1 201 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 D6R8Y8 96 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 IGLV3-19P01714 112 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 LOXL1Q08397 574 aaPredicted RBP5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 PCSK4Q6UW60 755 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 VSIG2Q96IQ7 327 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 C9orf85Q96MD7 179 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 GFRA4Q9GZZ7 299 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 IGHV3OR15-7A0A075B7D8 119 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 DKK4Q9UBT3 224 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 DEFA4P12838 97 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 PSMB8P28062 276 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 PRDM6Q9NQX0 595 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 NBR2O15453 112 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 GATA4P43694 442 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 C20orf197Q8N268 126 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 PLA2G2EQ9NZK7 142 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 MDFICQ9P1T7 246 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 WDR83OSQ9Y284 106 aa5.48□□□□□ -1.53
PDGFRA-201ENST00000257290 CLDN14O95500 239 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 CT62P0C5K7 136 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 LAGE3Q14657 143 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 SPRY4Q9C004 299 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 IGKV1-8A0A0C4DH67 115 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 BRI3O95415 125 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 GHRHP01286 108 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 IGFBP3P17936 291 aaPredicted RBP5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 ZPLD1Q8TCW7 415 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 GRPP07492 148 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 DDB2Q92466 427 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 IGHV5-10-1A0A0J9YXX1 117 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 LYZP61626 148 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 SNRPD3P62318 126 aaKnown RBP5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 MIR17HGQ75NE6 70 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 SLC25A29Q8N8R3 303 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 PYGO1Q9Y3Y4 419 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 NUP214P35658 2090 aaPredicted RBP5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 PLXNA3P51805 1871 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 MIA3Q5JRA6 1907 aa5.47□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM53AQ6NSI3 398 aaPredicted RBP5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 CDIP1Q9H305 208 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 PRSS46E5RG02 174 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 NDUFC1O43677 76 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms