RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 CCL24O00175 119 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 PPBPP02775 128 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.55
ZC3H4-201ENST00000253048 TRBV25-1A0A075B6N4 114 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 IGKV1D-17A0A075B6S4 117 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 TRAV13-1A0A0B4J241 112 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 Q8NFD4 153 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 FAM186AA6NE01 2351 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 UBE2BP63146 152 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 CLDN16Q9Y5I7 305 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 CBLN1P23435 193 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 CXCL2P19875 107 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 NPC2P61916 151 aa11.64□□□□□ -0.55
ZC3H4-201ENST00000253048 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 CCL18P55774 89 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 ERG28Q9UKR5 140 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 TEX48A0A1B0GUV7 120 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 SCN5AQ14524 2016 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 PSG3Q16557 428 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 A8MWV9 139 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 TET1Q8NFU7 2136 aa11.63□□□□□ -0.55
ZC3H4-201ENST00000253048 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 IGFBP3P17936 291 aaPredicted RBP11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 CD200R1LQ6Q8B3 271 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 C18orf12Q96KH6 178 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 COQ2Q96H96 371 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 LCTP09848 1927 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 IGKV1-9A0A0C4DH69 117 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 GP9P14770 177 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 SPINK13Q1W4C9 94 aa11.62□□□□□ -0.55
ZC3H4-201ENST00000253048 CHKB-CPT1BH3BT56 60 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 NIT1Q86X76 327 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 LEPROTO15243 131 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 SLAQ13239 276 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 A0A096LPF7 62 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 VCYO14598 125 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 CACNA1BQ00975 2339 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 DPM2O94777 84 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 Q8TCH9 128 aa11.61□□□□□ -0.55
ZC3H4-201ENST00000253048 G3V318 75 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 A0A087WWL8 130 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 IGHV3-16A0A0C4DH30 117 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 RHODO00212 210 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 LAGE3Q14657 143 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 CHD5Q8TDI0 1954 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 DKK1O94907 266 aa11.6□□□□□ -0.55
ZC3H4-201ENST00000253048 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 PIFOQ8TCI5 191 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 ICE1Q9Y2F5 2266 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 SPTA1P02549 2419 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 SHISA3A0PJX4 238 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 RNASE7Q9H1E1 156 aaKnown RBP11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 ZNF319Q9P2F9 582 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 CD55P08174 381 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 LY6G6EA0A0G2JKS1 128 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 U3KQA8 63 aa11.59□□□□□ -0.55
ZC3H4-201ENST00000253048 SCN2AQ99250 2005 aa11.58□□□□□ -0.55
ZC3H4-201ENST00000253048 CCL20P78556 96 aa11.58□□□□□ -0.55
ZC3H4-201ENST00000253048 Q9HAA7 133 aa11.58□□□□□ -0.55
ZC3H4-201ENST00000253048 A0A1B0GV90 55 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 F8W735 103 aaPredicted RBP11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 SBF1O95248 1867 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 F8VVB4 439 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 F8VWA3 439 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 NDUFA4O00483 81 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 Q8TAT8 98 aa11.58□□□□□ -0.56
ZC3H4-201ENST00000253048 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 H3BUT2 72 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 SH2D1AO60880 128 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 TBX6O95947 436 aaPredicted RBP11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 IGHV2-5P01817 119 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
ZC3H4-201ENST00000253048 IGKV1-12A0A0C4DH73 117 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms