RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ELOVL1Q9BW60 279 aa9.9□□□□□ -0.82
LSM8-201ENST00000249299 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
LSM8-201ENST00000249299 ATRQ13535 2644 aa9.9□□□□□ -0.82
LSM8-201ENST00000249299 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 CCL24O00175 119 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 GUK1Q16774 197 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 KRTAP24-1Q3LI83 254 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 UNQ9165/PRO28630Q6UXU0 137 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 HRH4Q9H3N8 390 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 MANBALQ9NQG1 85 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 PEMTQ9UBM1 199 aa9.89□□□□□ -0.83
LSM8-201ENST00000249299 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 ZNF320A2RRD8 509 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 IFNA1P01562 189 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 GCHFRP30047 84 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 SRSF2Q01130 221 aaKnown RBP9.88□□□□□ -0.83
LSM8-201ENST00000249299 SPATA31B1PQ5VZV4 182 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 C8orf86Q6ZUL3 223 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 EIF4E3Q8N5X7 224 aaKnown RBP9.88□□□□□ -0.83
LSM8-201ENST00000249299 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 C20orf24Q9BUV8 137 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 SLC25A2Q9BXI2 301 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 NKX6-2Q9C056 277 aaPredicted RBP9.88□□□□□ -0.83
LSM8-201ENST00000249299 SIGLEC8Q9NYZ4 499 aa9.88□□□□□ -0.83
LSM8-201ENST00000249299 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 OR7C2O60412 319 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 ZNF253O75346 499 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 HIST1H1EP10412 219 aaKnown RBP9.87□□□□□ -0.83
LSM8-201ENST00000249299 PDE6HQ13956 83 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 MORN5Q5VZ52 161 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 OR8I2Q8N0Y5 310 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 LYPD1Q8N2G4 141 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 OR4F17Q8NGA8 305 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 RAX2Q96IS3 184 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 OR4F4Q96R69 305 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 ZNF747Q9BV97 191 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 SCRT1Q9BWW7 348 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 SMPXQ9UHP9 88 aa9.87□□□□□ -0.83
LSM8-201ENST00000249299 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 HELTA6NFD8 242 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 GP9P14770 177 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 GALR1P47211 349 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 KRTAP10-3P60369 221 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 C16orf54Q6UWD8 224 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 C18orf65Q6ZTR6 163 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 OR9G4Q8NGQ1 327 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 FAM210AQ96ND0 272 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 TCEAL7Q9BRU2 100 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
LSM8-201ENST00000249299 A0A087X0K7 114 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 TRAV5A0A0B4J249 113 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 A0A1W2PRE2 83 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 M0QZ24 198 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 MRPS12O15235 138 aaKnown RBP9.85□□□□□ -0.83
LSM8-201ENST00000249299 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 IGLC2P0DOY2 106 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 FGF8P55075 233 aaPredicted RBP9.85□□□□□ -0.83
LSM8-201ENST00000249299 UBE2L3P68036 154 aaKnown RBP9.85□□□□□ -0.83
LSM8-201ENST00000249299 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 C11orf44Q8N8P7 122 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 GLMPQ8WWB7 406 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
LSM8-201ENST00000249299 C2orf70A6NJV1 201 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 CHEK1O14757 476 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
LSM8-201ENST00000249299 BCL2P10415 239 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 CCL20P78556 96 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 PEA15Q15121 130 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 DEFB136Q30KP8 78 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 TM4SF20Q53R12 229 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 SHISA2Q6UWI4 295 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 DLX4Q92988 240 aaPredicted RBP9.84□□□□□ -0.83
LSM8-201ENST00000249299 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 VAX2Q9UIW0 290 aa9.84□□□□□ -0.83
LSM8-201ENST00000249299 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 RBFOX3A6NFN3 312 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 CBLN1P23435 193 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 SLURP1P55000 103 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 ZNF506Q5JVG8 444 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 LEMD1Q68G75 181 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 PCNPQ8WW12 178 aaKnown RBP9.83□□□□□ -0.84
LSM8-201ENST00000249299 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
LSM8-201ENST00000249299 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 OVOL1O14753 267 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 PDE6DO43924 150 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 FOLR2P14207 255 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 ATF4P18848 351 aaPredicted RBP9.82□□□□□ -0.84
LSM8-201ENST00000249299 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
LSM8-201ENST00000249299 NSUN5P1Q3KNT7 163 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 TMPRSS5Q9H3S3 457 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms