RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 CENPVQ7Z7K6 275 aaPredicted RBP9.41□□□□□ -0.9
SOX9-201ENST00000245479 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 SLC25A33Q9BSK2 321 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 C16orf97H3BN30 126 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 NRN1LQ496H8 165 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 LSM4Q9Y4Z0 139 aaKnown RBP9.41□□□□□ -0.9
SOX9-201ENST00000245479 NDUFB3O43676 98 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 BMI1P35226 326 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 ATP5L2Q7Z4Y8 100 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
SOX9-201ENST00000245479 NPIPB11E5RHQ5 1161 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 NDUFB8O95169 186 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
SOX9-201ENST00000245479 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 TMEM160Q9NX00 188 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 HCFC1P51610 2035 aa9.4□□□□□ -0.9
SOX9-201ENST00000245479 C11orf53Q8IXP5 236 aa9.4□□□□□ -0.91
SOX9-201ENST00000245479 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.91
SOX9-201ENST00000245479 LOC105371242A0A075B767 164 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 PPIAL4CA0A0B4J2A2 164 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 GOSR1O95249 250 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 RPL7P18124 248 aaKnown RBP9.39□□□□□ -0.91
SOX9-201ENST00000245479 FXYD7P58549 80 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 CKS1BP61024 79 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
SOX9-201ENST00000245479 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 IGKV3-7A0A075B6H7 116 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.39□□□□□ -0.91
SOX9-201ENST00000245479 CD40P25942 277 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 PSMB2P49721 201 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 DEFB125Q8N687 156 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 SS18L1O75177 396 aaPredicted RBP9.39□□□□□ -0.91
SOX9-201ENST00000245479 VWC2Q2TAL6 325 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 PRO3102Q9H379 93 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
SOX9-201ENST00000245479 CLEC3BP05452 202 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 AHRRA9YTQ3 701 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 GGTLC3B5MD39 225 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 CD69Q07108 199 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 SCNM1Q9BWG6 230 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
SOX9-201ENST00000245479 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
SOX9-201ENST00000245479 ZNF418Q8TF45 676 aaPredicted RBP9.38□□□□□ -0.91
SOX9-201ENST00000245479 RPEQ96AT9 228 aa9.38□□□□□ -0.91
SOX9-201ENST00000245479 TOMM40O96008 361 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 ZNF883P0CG24 379 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 TNFRSF1AP19438 455 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
SOX9-201ENST00000245479 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 FAM168AQ92567 244 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 C11orf52Q96A22 123 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 Q9H3A6 140 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 MBNL3Q9NUK0 354 aaKnown RBP9.37□□□□□ -0.91
SOX9-201ENST00000245479 J3KRW8 73 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 ATP5IP56385 69 aaPredicted RBP9.37□□□□□ -0.91
SOX9-201ENST00000245479 PSG3Q16557 428 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 KLF17Q5JT82 389 aaPredicted RBP9.37□□□□□ -0.91
SOX9-201ENST00000245479 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 ZNF714Q96N38 554 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 MTORP42345 2549 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 ORMDL3Q8N138 153 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 IGHV3-49A0A0A0MS15 119 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
SOX9-201ENST00000245479 NAV2Q8IVL1 2488 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 C9orf118A6NHY6 69 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 PROP1O75360 226 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 SAA1P0DJI8 122 aaPredicted RBP9.36□□□□□ -0.91
SOX9-201ENST00000245479 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
SOX9-201ENST00000245479 Q8NFD4 153 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 FOXC2Q99958 501 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 KLK15Q9H2R5 256 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 DKK4Q9UBT3 224 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 TP53TG3Q9ULZ0 132 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 SLC25A15Q9Y619 301 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 IGKV3-15P01624 115 aa9.36□□□□□ -0.91
SOX9-201ENST00000245479 HBDP02042 147 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms