RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LY6G5BQ8NDX9 201 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 GRAMD2BQ96HH9 432 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 FAM110AQ9BQ89 295 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MRPL36Q9P0J6 103 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MAP1BP46821 2468 aaKnown RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 GRIFINA4D1Z8 144 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 DNAJC9-AS1A6NH13 148 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 LY6LH3BQJ8 138 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 SERF1AO75920 110 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 PYYP10082 97 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MFAP2P55001 183 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 UCNP55089 124 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 TNXAQ16473 311 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 PRR30Q53SZ7 412 aaPredicted RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 ATP5L2Q7Z4Y8 100 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 MUC15Q8N387 334 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 C5orf17Q8NAS9 161 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 RPEQ96AT9 228 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF331Q9NQX6 463 aaPredicted RBP6.2□□□□□ -1.42
CXCR4-201ENST00000241393 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
CXCR4-201ENST00000241393 APC2O95996 2303 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 DMXL1Q9Y485 3027 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 ROS1P08922 2347 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 PPIAL4CA0A0B4J2A2 164 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 LIPFP07098 398 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 PPIAL4GP0DN37 164 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 PSG1P11464 419 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 GP9P14770 177 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 EDN2P20800 178 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 COL8A2P25067 703 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 HOXD3P31249 432 aaPredicted RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 SSTP61278 116 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 UBE2G1P62253 170 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 FXYD3Q14802 87 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 USF2Q15853 346 aaPredicted RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF672Q499Z4 452 aaPredicted RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 HCP5Q6MZN7 132 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 OR8B3Q8NGG8 313 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 FMC1Q96HJ9 113 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 GPR82Q96P67 336 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 OR8B2Q96RD0 313 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 C20orf144Q9BQM9 153 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 ATG101Q9BSB4 218 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 GNB4Q9HAV0 340 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 MRPL27Q9P0M9 148 aaKnown RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF492Q9P255 531 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 RNF24Q9Y225 148 aa6.19□□□□□ -1.42
CXCR4-201ENST00000241393 SOX21Q9Y651 276 aaPredicted RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 ANKRD11Q6UB99 2663 aaPredicted RBP6.19□□□□□ -1.42
CXCR4-201ENST00000241393 PKDREJQ9NTG1 2253 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 IGHV3-72A0A0B4J1Y9 119 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 TRBV6-1A0A0K0K1D8 114 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 A0A1B0GUS0 222 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 BMPR1BO00238 502 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 OR2J3O76001 311 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 TOMM40O96008 361 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 APCSP02743 223 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 GPX1P07203 203 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 ORM2P19652 201 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 SIGLECL1Q8N7X8 197 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 OR11H6Q8NGC7 330 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 OR1B1Q8NGR6 318 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 SRSF12Q8WXF0 261 aaKnown RBP6.18□□□□□ -1.42
CXCR4-201ENST00000241393 KCNS1Q96KK3 526 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 HSPB9Q9BQS6 159 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 SAMD10Q9BYL1 202 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
CXCR4-201ENST00000241393 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 PCNX1Q96RV3 2341 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 FAM231BA6NCW3 169 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 PGPA6NDG6 321 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 A8MZ25 164 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 I3L2K1 104 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 M0R1W7 72 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 MOSP00540 346 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
CXCR4-201ENST00000241393 CEACAM3P40198 252 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 KLF5Q13887 457 aaPredicted RBP6.17□□□□□ -1.42
CXCR4-201ENST00000241393 TPTE2P1Q5T6R2 138 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 S100A7AQ86SG5 101 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 NRACQ8N912 160 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 TBX15Q96SF7 602 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 GFRA4Q9GZZ7 299 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 RAB1BQ9H0U4 201 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 OTORQ9NRC9 128 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 POLEQ07864 2286 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
CXCR4-201ENST00000241393 ZNF705FA8MVS1 300 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms