RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 FGF8P55075 233 aaPredicted RBP8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 UBE2G2P60604 165 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 LEMD1Q68G75 181 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 TMEM190Q8WZ59 177 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 SLC25A39Q9BZJ4 359 aaPredicted RBP8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 MRPL36Q9P0J6 103 aaKnown RBP8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 C9orf66Q5T8R8 295 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 RAB24Q969Q5 203 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 BIN3Q9NQY0 253 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZNF98A6NK75 572 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 FOLR2P14207 255 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 GTSCR1Q86UQ5 136 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 CFHR3Q02985 330 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 MEOX2P50222 304 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 RAX2Q96IS3 184 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 PARD6GQ9BYG4 376 aaPredicted RBP8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 RPRMQ9NS64 109 aa8.58□□□□□ -1.04
TNFAIP3-201ENST00000237289 IGHV7-4-1A0A0J9YVY3 117 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 LCN12Q6JVE5 192 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 ADMP35318 185 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 TUBA4BQ9H853 241 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 ZANQ9Y493 2812 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 SLC25A5P05141 298 aaKnown RBP8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 GCSAMLQ5JQS6 135 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 MIR17HGQ75NE6 70 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 C11orf1Q9H5F2 150 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 C1orf196B1AJZ1 125 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 H3BTX0 84 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 TEX261Q6UWH6 196 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 ZNF738Q8NE65 137 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 SMPXQ9UHP9 88 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 DMRT1Q9Y5R6 373 aa8.57□□□□□ -1.04
TNFAIP3-201ENST00000237289 PSG9Q00887 426 aa8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 CBLN1P23435 193 aa8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 VWC2Q2TAL6 325 aa8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 K7EMT4 169 aa8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 NBEAP1P0C6P0 100 aa8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
TNFAIP3-201ENST00000237289 SULT1A2P50226 295 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 C2orf70A6NJV1 201 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 ARL14EPLP0DKL9 152 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 UBE2G1P62253 170 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 HAGHQ16775 308 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 C1orf194Q5T5A4 169 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 UNQ9165/PRO28630Q6UXU0 137 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 NDFIP1Q9BT67 221 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 KRBOX1C9JBD0 128 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 HIST1H1EP10412 219 aaKnown RBP8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 RNF152Q8N8N0 203 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 RPS10P5Q9NQ39 176 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 CYTL1Q9NRR1 136 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 INSL3P51460 131 aa8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 SAT2Q96F10 170 aaPredicted RBP8.55□□□□□ -1.04
TNFAIP3-201ENST00000237289 TRAV5A0A0B4J249 113 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 KIAA0141Q14154 515 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 PEA15Q15121 130 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 GUK1Q16774 197 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 IGKV1OR2-108A0A075B7D4 117 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 LGALS9O00182 355 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 RGS13O14921 159 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 SEPSECSQ9HD40 501 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 G3V3Q6 166 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 OR10J6PQ8NGY7 276 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
TNFAIP3-201ENST00000237289 PGPA6NDG6 321 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRSS46E5RG02 174 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 REC114Q7Z4M0 266 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 GCHFRP30047 84 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 SUMO1P63165 101 aaKnown RBP8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRR20EP86478 221 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRR20CP86479 221 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRR20DP86480 221 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRR20BP86481 221 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 PRR20AP86496 221 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 RFNGQ9Y644 331 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 AKR1C3P42330 323 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 FHITP49789 147 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 DEFA6Q01524 100 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 ZNF674Q2M3X9 581 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 RXFP4Q8TDU9 374 aa8.53□□□□□ -1.04
TNFAIP3-201ENST00000237289 CITED1Q99966 193 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms