RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF788Q6ZQV5 615 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 A1L4Q6 167 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 M0R1B8 84 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 COL8A1P27658 744 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 CEP250Q9BV73 2442 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 A0A096LNJ9 63 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 UPK2O00526 184 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 GCSHP23434 173 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 GLRXP35754 106 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.6
SF1-201ENST00000227503 FA2HQ7L5A8 372 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.6
SF1-201ENST00000227503 DEFB108BQ8NET1 73 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 MLST8Q9BVC4 326 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.6
SF1-201ENST00000227503 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.6
SF1-201ENST00000227503 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
SF1-201ENST00000227503 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
SF1-201ENST00000227503 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
SF1-201ENST00000227503 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
SF1-201ENST00000227503 IGLV3-9A0A075B6K5 115 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 PRNDQ9UKY0 176 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 IGKV1D-37A0A075B6S9 117 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 C19orf71A6NCJ1 209 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 FSTL3O95633 263 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 GATA4P43694 442 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 FXYD2P54710 66 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 PSG3Q16557 428 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 SAMD5Q5TGI4 173 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
SF1-201ENST00000227503 HSD52Q0P140 79 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 C2orf83Q53S99 150 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
SF1-201ENST00000227503 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 FABP2P12104 132 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 MYCNOSP40205 109 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 DEFB109BQ30KR1 87 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 SH2D6Q7Z4S9 175 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 BOD1L2Q8IYS8 172 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 SVIPQ8NHG7 77 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 SRSF12Q8WXF0 261 aaKnown RBP11.25□□□□□ -0.61
SF1-201ENST00000227503 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 LTAP01374 205 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 CEACAM3P40198 252 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 WFDC2Q14508 124 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 C19orf24Q9BVV8 132 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 RNF7Q9UBF6 113 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 ATMQ13315 3056 aa11.25□□□□□ -0.61
SF1-201ENST00000227503 RAI1Q7Z5J4 1906 aaPredicted RBP11.24□□□□□ -0.61
SF1-201ENST00000227503 BMI1P35226 326 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 RPRMLQ8N4K4 120 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 FTH1P19P0C7X4 201 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 Q9H3A6 140 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 AKAP13Q12802 2813 aa11.24□□□□□ -0.61
SF1-201ENST00000227503 PKDREJQ9NTG1 2253 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 CEACAM4O75871 244 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 RAB9AP51151 201 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 ZADH2Q8N4Q0 377 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 FAM215AQ9Y5M1 114 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 TCRAP04437 139 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 CSN1S1P47710 185 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 INSL3P51460 131 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 CCL13Q99616 98 aa11.23□□□□□ -0.61
SF1-201ENST00000227503 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 C22orf46C9J442 243 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 OVOL3O00110 214 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 DLL1O00548 723 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 IGHV1-46P01743 117 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 FAM216BQ8N7L0 139 aa11.22□□□□□ -0.61
SF1-201ENST00000227503 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms