RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PRR27Q6MZM9 219 aa19.75■□□□□ 0.75
RUNDC3A-201ENST00000225441 SRSF12Q8WXF0 261 aaKnown RBP19.75■□□□□ 0.75
RUNDC3A-201ENST00000225441 P01737 135 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 IGHV4-39P01824 125 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 GDF5OSQ5U4N7 250 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 S100A7AQ86SG5 101 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 KLHDC1Q8N7A1 406 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 LY6G5BQ8NDX9 201 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 DAZAP1Q96EP5 407 aaKnown RBP19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 TENM4Q6N022 2769 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 C20orf202A1L168 122 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 C3orf79P0CE67 100 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 CNTFRP26992 372 aa19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 GPR6P46095 362 aaPredicted RBP19.74■□□□□ 0.75
RUNDC3A-201ENST00000225441 NPIPB6E9PJ23 425 aa19.73■□□□□ 0.75
RUNDC3A-201ENST00000225441 LYPD1Q8N2G4 141 aa19.73■□□□□ 0.75
RUNDC3A-201ENST00000225441 OR8B3Q8NGG8 313 aa19.73■□□□□ 0.75
RUNDC3A-201ENST00000225441 OR8B2Q96RD0 313 aa19.73■□□□□ 0.75
RUNDC3A-201ENST00000225441 HSBP1O75506 76 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 RPLP1P05386 114 aaKnown RBP19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 PSG1P11464 419 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 HOXB4P17483 251 aaPredicted RBP19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 RUSC1-AS1Q66K80 236 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 RASL11BQ9BPW5 248 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 SLC25A39Q9BZJ4 359 aaPredicted RBP19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 UQCR10Q9UDW1 63 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 RNF114Q9Y508 228 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 LIPFP07098 398 aa19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 RBPMS2Q6ZRY4 209 aaKnown RBP19.72■□□□□ 0.75
RUNDC3A-201ENST00000225441 FBXL15Q9H469 300 aa19.71■□□□□ 0.75
RUNDC3A-201ENST00000225441 SPATA45Q537H7 98 aa19.7■□□□□ 0.74
RUNDC3A-201ENST00000225441 PSMG3-AS1Q96PY0 264 aa19.7■□□□□ 0.74
RUNDC3A-201ENST00000225441 USP9YO00507 2555 aaPredicted RBP19.7■□□□□ 0.74
RUNDC3A-201ENST00000225441 C16orf54Q6UWD8 224 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 Q86TA4 180 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 OR11H6Q8NGC7 330 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 NRGNQ92686 78 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 CHCHD1Q96BP2 118 aaKnown RBP19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 FOXA3P55318 350 aaPredicted RBP19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 LYZP61626 148 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 SHANK2-AS3Q9BTD1 123 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 WNT10AQ9GZT5 417 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 C1RLQ9NZP8 487 aa19.69■□□□□ 0.74
RUNDC3A-201ENST00000225441 CEACAM3P40198 252 aa19.68■□□□□ 0.74
RUNDC3A-201ENST00000225441 PLGLAQ15195 96 aa19.68■□□□□ 0.74
RUNDC3A-201ENST00000225441 NPBQ8NG41 125 aa19.68■□□□□ 0.74
RUNDC3A-201ENST00000225441 ZFP30Q9Y2G7 519 aa19.68■□□□□ 0.74
RUNDC3A-201ENST00000225441 NAV3Q8IVL0 2385 aa19.68■□□□□ 0.74
RUNDC3A-201ENST00000225441 TRAV30A0A087WSZ9 112 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 VWC2LB2RUY7 222 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 NTF3P20783 257 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 BPIFA4PQ86YQ2 179 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 DPM3Q9P2X0 92 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 FAM181BA6NEQ2 426 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 M0R2Z0 102 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 BTF3P20290 206 aaKnown RBP19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 COX7A1P24310 79 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 HTR1DP28221 377 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 CAMPP49913 170 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 TMEM75Q8N9X5 138 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 ZNF48Q96MX3 618 aaPredicted RBP19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 NDFIP1Q9BT67 221 aa19.67■□□□□ 0.74
RUNDC3A-201ENST00000225441 H3BRN7 92 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 K7EQM0 130 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 M0R1W7 72 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 HAX1O00165 279 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 IGKV1-17P01599 117 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 IGLC2P0DOY2 106 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 IGLC3P0DOY3 106 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 ATP5J2P56134 94 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 FAM19A2Q8N3H0 131 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 OR4F17Q8NGA8 305 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 RPH3ALQ9UNE2 315 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 AKAP6Q13023 2319 aa19.66■□□□□ 0.74
RUNDC3A-201ENST00000225441 A0A1B0GW15 77 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 NDUFA3O95167 84 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 GAGE1Q13065 139 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 LINC00322Q6ZN03 302 aaPredicted RBP19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 GTSF1Q8WW33 167 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 TRBV19A0A075B6N1 114 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 K7EIM0 57 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 NBR2O15453 112 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 CNIH1O95406 144 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 TCF24Q7RTU0 167 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 BPESC1Q9GZL8 116 aa19.65■□□□□ 0.74
RUNDC3A-201ENST00000225441 IGHV3-21A0A0B4J1V1 117 aa19.64■□□□□ 0.73
RUNDC3A-201ENST00000225441 IGLV2-11P01706 119 aa19.64■□□□□ 0.73
RUNDC3A-201ENST00000225441 ARL6IP6Q8N6S5 226 aa19.64■□□□□ 0.73
RUNDC3A-201ENST00000225441 OR2D3Q8NGH3 330 aa19.64■□□□□ 0.73
RUNDC3A-201ENST00000225441 TIMM23O14925 209 aa19.63■□□□□ 0.73
RUNDC3A-201ENST00000225441 COL5A1-AS1Q5SY13 56 aa19.63■□□□□ 0.73
RUNDC3A-201ENST00000225441 GATD1Q8NB37 220 aa19.63■□□□□ 0.73
RUNDC3A-201ENST00000225441 OR5AL1P0C617 328 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 APELAP0DMC3 54 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 KRTAP10-9P60411 292 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 LEMD1Q68G75 181 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 RNASEKQ6P5S7 137 aaKnown RBP19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 ONECUT1Q9UBC0 465 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 TRAV9-2A0A087WT02 112 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 PDE6HQ13956 83 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms