RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
SFXN3-201ENST00000224807 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
SFXN3-201ENST00000224807 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 A0A1W2PPI3 338 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 TNFRSF1AP19438 455 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 CSN1S1P47710 185 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 GTF2H5Q6ZYL4 71 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 TMEM178AQ8NBL3 297 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 DEFB104AQ8WTQ1 72 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 RNF7Q9UBF6 113 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 NEU4Q8WWR8 484 aaPredicted RBP11.49□□□□□ -0.57
SFXN3-201ENST00000224807 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 FDCSPQ8NFU4 85 aa11.49□□□□□ -0.57
SFXN3-201ENST00000224807 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
SFXN3-201ENST00000224807 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
SFXN3-201ENST00000224807 COL6A6A6NMZ7 2263 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 FNDC10F2Z333 226 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
SFXN3-201ENST00000224807 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 FER1L6-AS2Q96M78 137 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 DKK2Q9UBU2 259 aa11.48□□□□□ -0.57
SFXN3-201ENST00000224807 A1L4Q6 167 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 IGHV3-23P01764 117 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 EVI2AP22794 236 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 COX7A1P24310 79 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 C22orf34Q6ZV56 151 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 FAM231DQ6ZW35 169 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
SFXN3-201ENST00000224807 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 COL27A1Q8IZC6 1860 aaPredicted RBP11.47□□□□□ -0.57
SFXN3-201ENST00000224807 COX8AP10176 69 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 FAM27E3Q08E93 113 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
SFXN3-201ENST00000224807 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 ANKRD11Q6UB99 2663 aaPredicted RBP11.46□□□□□ -0.57
SFXN3-201ENST00000224807 PSMB11A5LHX3 300 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 A6NDN8 102 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 C19orf24Q9BVV8 132 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 CREBBPQ92793 2442 aa11.46□□□□□ -0.57
SFXN3-201ENST00000224807 PRSS1P07477 247 aa11.46□□□□□ -0.58
SFXN3-201ENST00000224807 AMTNQ6UX39 209 aa11.46□□□□□ -0.58
SFXN3-201ENST00000224807 Q8TAT8 98 aa11.46□□□□□ -0.58
SFXN3-201ENST00000224807 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.58
SFXN3-201ENST00000224807 CNIH1O95406 144 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 TMEM186Q96B77 213 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 SPRY4Q9C004 299 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 CEP295Q9C0D2 2601 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 PAX2Q02962 417 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 SPOCK3Q9BQ16 436 aa11.45□□□□□ -0.58
SFXN3-201ENST00000224807 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 LYPD2Q6UXB3 125 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 SLC25A48Q6ZT89 311 aaKnown RBP11.44□□□□□ -0.58
SFXN3-201ENST00000224807 Q86TA4 180 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 BCL6BQ8N143 479 aaPredicted RBP11.44□□□□□ -0.58
SFXN3-201ENST00000224807 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 ZNF714Q96N38 554 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 FBXL15Q9H469 300 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 TECTAO75443 2155 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 LTAP01374 205 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 FCGR2BP31994 310 aaPredicted RBP11.44□□□□□ -0.58
SFXN3-201ENST00000224807 MZT1Q08AG7 82 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 PSG3Q16557 428 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 MBNL2Q5VZF2 373 aaKnown RBP11.44□□□□□ -0.58
SFXN3-201ENST00000224807 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 CACNG8Q8WXS5 425 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 CKS2P33552 79 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 TWIST1Q15672 202 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 JKAMPQ9P055 326 aa11.44□□□□□ -0.58
SFXN3-201ENST00000224807 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
SFXN3-201ENST00000224807 RIGQ13278 110 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 SIGLEC8Q9NYZ4 499 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 FABP2P12104 132 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 ZADH2Q8N4Q0 377 aa11.43□□□□□ -0.58
SFXN3-201ENST00000224807 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
SFXN3-201ENST00000224807 CGB3P0DN86 165 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms