RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 IGHV1-46P01743 117 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.64□□□□□ -1.03
VPS18-201ENST00000220509 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 SNRNP40Q96DI7 357 aaKnown RBP8.64□□□□□ -1.03
VPS18-201ENST00000220509 SPATA25Q9BR10 227 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 SOX21Q9Y651 276 aaPredicted RBP8.64□□□□□ -1.03
VPS18-201ENST00000220509 RELNP78509 3460 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 CGAP01215 116 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 IGKV3-15P01624 115 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 LINC00869P0C866 280 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 GNG5P63218 68 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 PYGO2Q9BRQ0 406 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
VPS18-201ENST00000220509 SAA2-SAA4A0A096LPE2 208 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 APCSP02743 223 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 SAA2P0DJI9 122 aaPredicted RBP8.63□□□□□ -1.03
VPS18-201ENST00000220509 RPL27AP46776 148 aaKnown RBP8.63□□□□□ -1.03
VPS18-201ENST00000220509 PRR30Q53SZ7 412 aaPredicted RBP8.63□□□□□ -1.03
VPS18-201ENST00000220509 CENPWQ5EE01 88 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 TIMM9Q9Y5J7 89 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 NCKAP5O14513 1909 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 MPDU1O75352 247 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 DUTP33316 252 aaKnown RBP8.63□□□□□ -1.03
VPS18-201ENST00000220509 CA7P43166 264 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 SSX8Q7RTT4 187 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 GRAMD2BQ96HH9 432 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 FGF23Q9GZV9 251 aaPredicted RBP8.63□□□□□ -1.03
VPS18-201ENST00000220509 OR9G9P0C7N8 305 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 UCNP55089 124 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 Q6ZS92 163 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 TMEM160Q9NX00 188 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 IL36BQ9NZH7 164 aa8.63□□□□□ -1.03
VPS18-201ENST00000220509 NBL1P41271 181 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 Q6ZR03 302 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 SYT8Q8NBV8 401 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 LINC00473A8K010 186 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 GPX1P07203 203 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 IGLL1P15814 213 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 CSN1S1P47710 185 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 RPL15P61313 204 aaKnown RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 C10orf113Q5VZT2 155 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 RASL11AQ6T310 242 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 AGMATQ9BSE5 352 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 C11orf1Q9H5F2 150 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 H3BTX0 84 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 SH2D6Q7Z4S9 175 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 OR4C13Q8NGP0 309 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 MBD3L2Q8NHZ7 208 aaPredicted RBP8.62□□□□□ -1.03
VPS18-201ENST00000220509 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 CENPEQ02224 2701 aa8.62□□□□□ -1.03
VPS18-201ENST00000220509 TRBV20OR9-2A0A075B6H5 130 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 IGKV1D-17A0A075B6S4 117 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 OR4F17Q8NGA8 305 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 OR5AN1Q8NGI8 311 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 OR9G1Q8NH87 305 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 KIAA1549Q9HCM3 1950 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 CHEK1O14757 476 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 DYSFO75923 2080 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 HIVEP3Q5T1R4 2406 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 SH2D7A6NKC9 451 aaPredicted RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 RPL7P18124 248 aaKnown RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 MBNL2Q5VZF2 373 aaKnown RBP8.61□□□□□ -1.03
VPS18-201ENST00000220509 UFSP1Q6NVU6 142 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 OR9G4Q8NGQ1 327 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
VPS18-201ENST00000220509 CD24P25063 80 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 POU2AF1Q16633 256 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 CLEC7AQ9BXN2 247 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 ZNF257Q9Y2Q1 563 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 CCDC168Q8NDH2 2452 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 A0A087WX48 190 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 TRAV3A0A0B4J244 114 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 A0A0G2JNJ9 132 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 BMPR1BO00238 502 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 VDAC2P45880 294 aaPredicted RBP8.6□□□□□ -1.03
VPS18-201ENST00000220509 LY6DQ14210 128 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 Q6ZS49 121 aa8.6□□□□□ -1.03
VPS18-201ENST00000220509 RASL11BQ9BPW5 248 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms