RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 FBLN7Q53RD9 439 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 MPV17L2Q567V2 206 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 TMEM75Q8N9X5 138 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 SCRT2Q9NQ03 307 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 TP73-AS1Q9UF72 201 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 Q71RC1 249 aaPredicted RBP17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 A0A1B0GUT8 65 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 HSBP1L1C9JCN9 74 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 BUB1B-PAK6H3BSN5 160 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 NEU4Q8WWR8 484 aaPredicted RBP17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 RASL11BQ9BPW5 248 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 TMUB1Q9BVT8 246 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 MS4A6AQ9H2W1 248 aa17.55■□□□□ 0.4
HTATSF1-201ENST00000218364 ZNF138P52744 262 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 SRSF12Q8WXF0 261 aaKnown RBP17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 ZC2HC1AQ96GY0 325 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 NGBQ9NPG2 151 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 RNF24Q9Y225 148 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 ASPMQ8IZT6 3477 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 TRBV19A0A075B6N1 114 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 IGKV1-17P01599 117 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 HTR1DP28221 377 aa17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 RNASE8Q8TDE3 154 aaKnown RBP17.54■□□□□ 0.4
HTATSF1-201ENST00000218364 LOC105371242A0A075B767 164 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 PRRG2O14669 202 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 HLA-DRB1P01911 266 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 FOXC1Q12948 553 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 RIGQ13278 110 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 SRSF8Q9BRL6 282 aaKnown RBP17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 SHANK2-AS3Q9BTD1 123 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 SCNM1Q9BWG6 230 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 DYNLRB1Q9NP97 96 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 A0A1B0GW15 77 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 BVES-AS1Q5T3Y7 98 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 LINC01545Q5VT33 79 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 FBXL15Q9H469 300 aa17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 RALYQ9UKM9 306 aaKnown RBP17.53■□□□□ 0.4
HTATSF1-201ENST00000218364 LYPD1Q8N2G4 141 aa17.52■□□□□ 0.4
HTATSF1-201ENST00000218364 RNF5Q99942 180 aa17.52■□□□□ 0.4
HTATSF1-201ENST00000218364 PLXNB1O43157 2135 aa17.52■□□□□ 0.39
HTATSF1-201ENST00000218364 SHISA9B4DS77 424 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 H3BRN7 92 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 RBP4P02753 201 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 ARMS2P0C7Q2 107 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 DLX1P56177 255 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 BPIFA4PQ86YQ2 179 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 TRAV30A0A087WSZ9 112 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 E7EQL1 145 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 NUDT3O95989 172 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 RBX1P62877 108 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 SIGLEC15Q6ZMC9 328 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 TAX1BP3O14907 124 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 TOX4O94842 621 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 C12orf54Q6X4T0 127 aa17.51■□□□□ 0.39
HTATSF1-201ENST00000218364 RHOGP84095 191 aa17.5■□□□□ 0.39
HTATSF1-201ENST00000218364 DEFB125Q8N687 156 aa17.5■□□□□ 0.39
HTATSF1-201ENST00000218364 PSG8Q9UQ74 426 aa17.5■□□□□ 0.39
HTATSF1-201ENST00000218364 C17orf77Q96MU5 243 aa17.5■□□□□ 0.39
HTATSF1-201ENST00000218364 K7EIM0 57 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 K7EQM0 130 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 PSG3Q16557 428 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 Q6AWC8 147 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 AP5S1Q9NUS5 200 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 CFAP47Q6ZTR5 3102 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 PCP4P48539 62 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 ZNF747Q9BV97 191 aa17.49■□□□□ 0.39
HTATSF1-201ENST00000218364 MRPS12O15235 138 aaKnown RBP17.48■□□□□ 0.39
HTATSF1-201ENST00000218364 CSN3P07498 182 aa17.48■□□□□ 0.39
HTATSF1-201ENST00000218364 CRIP1P50238 77 aa17.48■□□□□ 0.39
HTATSF1-201ENST00000218364 PRB3Q04118 309 aaPredicted RBP17.48■□□□□ 0.39
HTATSF1-201ENST00000218364 LY6LH3BQJ8 138 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 OR4C5Q8NGB2 326 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 RPEQ96AT9 228 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 MCRIP2Q9BUT9 160 aaKnown RBP17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 VAMP3Q15836 100 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 ZNF493Q6ZR52 646 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 ZNF491Q8N8L2 437 aa17.47■□□□□ 0.39
HTATSF1-201ENST00000218364 HIST1H1AQ02539 215 aaPredicted RBP17.46■□□□□ 0.39
HTATSF1-201ENST00000218364 RPS20P60866 119 aaKnown RBP17.46■□□□□ 0.39
HTATSF1-201ENST00000218364 ZNF414Q96IQ9 312 aa17.46■□□□□ 0.39
HTATSF1-201ENST00000218364 SPTBN2O15020 2390 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 MUC21A0A0G2JKD1 596 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 MUC21A0A140T8X8 626 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 CSN1S1P47710 185 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 MUC21Q5SSG8 566 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 OR10AG1Q8NH19 301 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 WI2-2373I1.2A0A1W2PRP0 233 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 PLGLAQ15195 96 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 FA2HQ7L5A8 372 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 RNF125Q96EQ8 232 aa17.45■□□□□ 0.38
HTATSF1-201ENST00000218364 COX8AP10176 69 aa17.44■□□□□ 0.38
HTATSF1-201ENST00000218364 COX7A1P24310 79 aa17.44■□□□□ 0.38
HTATSF1-201ENST00000218364 APOBEC3AP31941 199 aaPredicted RBP17.44■□□□□ 0.38
HTATSF1-201ENST00000218364 PMCHL2Q9BQD1 86 aa17.44■□□□□ 0.38
HTATSF1-201ENST00000218364 PRSS3P2Q8NHM4 247 aa17.44■□□□□ 0.38
HTATSF1-201ENST00000218364 PPIAL4CA0A0B4J2A2 164 aa17.43■□□□□ 0.38
HTATSF1-201ENST00000218364 B9A039 149 aa17.43■□□□□ 0.38
HTATSF1-201ENST00000218364 H0Y8G0 127 aa17.43■□□□□ 0.38
HTATSF1-201ENST00000218364 CD5LO43866 347 aa17.43■□□□□ 0.38
HTATSF1-201ENST00000218364 PPIAL4GP0DN37 164 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms