RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KALRNO60229 2985 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 A0A1B0GW15 77 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 SH2D7A6NKC9 451 aaPredicted RBP10.54□□□□□ -0.72
SRP54-201ENST00000216774 H3BRN7 92 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 M0QZ24 198 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 COX7A1P24310 79 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 MUC15Q8N387 334 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 TTC28Q96AY4 2481 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 ZNF292O60281 2723 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 A0A1B0GUT8 65 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 K7EIM0 57 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 OVOL3O00110 214 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 CD24P25063 80 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
SRP54-201ENST00000216774 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 ROS1P08922 2347 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 CEP250Q9BV73 2442 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 CNIH1O95406 144 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 PRB3Q04118 309 aaPredicted RBP10.53□□□□□ -0.72
SRP54-201ENST00000216774 RIGQ13278 110 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 Q6AWC8 147 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 ZC2HC1AQ96GY0 325 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 TMEM191AQ9H0A3 160 aa10.53□□□□□ -0.72
SRP54-201ENST00000216774 LAMA5O15230 3695 aa10.52□□□□□ -0.72
SRP54-201ENST00000216774 AKAP13Q12802 2813 aa10.52□□□□□ -0.72
SRP54-201ENST00000216774 ZNF318Q5VUA4 2279 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
SRP54-201ENST00000216774 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 HTR1DP28221 377 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 PET117Q6UWS5 81 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 SIGLEC15Q6ZMC9 328 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 S100A7AQ86SG5 101 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 HSPB8Q9UJY1 196 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 ANKRD11Q6UB99 2663 aaPredicted RBP10.52□□□□□ -0.73
SRP54-201ENST00000216774 MALRD1Q5VYJ5 2156 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 ADGRG4Q8IZF6 3080 aa10.52□□□□□ -0.73
SRP54-201ENST00000216774 HLA-DRB1P01911 266 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 PSG3Q16557 428 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 LYNX1G3V0Z9 82 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 TIMM23O14925 209 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 TOX4O94842 621 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 LYNX1P0DP58 116 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 ZNF491Q8N8L2 437 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 RNF125Q96EQ8 232 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
SRP54-201ENST00000216774 PKDREJQ9NTG1 2253 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 LY6G5BQ8NDX9 201 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 VKORC1Q9BQB6 163 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 ZGRF1Q86YA3 2104 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 WI2-2373I1.2A0A1W2PRP0 233 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 HSBP1L1C9JCN9 74 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
SRP54-201ENST00000216774 NBR2O15453 112 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 PDE6HQ13956 83 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 NPBQ8NG41 125 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 ONECUT1Q9UBC0 465 aa10.5□□□□□ -0.73
SRP54-201ENST00000216774 TRAV30A0A087WSZ9 112 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 TCF21O43680 179 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 IL4P05112 153 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 Q71RC1 249 aaPredicted RBP10.49□□□□□ -0.73
SRP54-201ENST00000216774 OR11H6Q8NGC7 330 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 ZNF414Q96IQ9 312 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 ZNF48Q96MX3 618 aaPredicted RBP10.49□□□□□ -0.73
SRP54-201ENST00000216774 NDUFA3O95167 84 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 PRR30Q53SZ7 412 aaPredicted RBP10.49□□□□□ -0.73
SRP54-201ENST00000216774 UNQ5815/PRO19632Q6UWF5 114 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 NEU4Q8WWR8 484 aaPredicted RBP10.49□□□□□ -0.73
SRP54-201ENST00000216774 TMUB1Q9BVT8 246 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 DPM3Q9P2X0 92 aa10.49□□□□□ -0.73
SRP54-201ENST00000216774 ATMQ13315 3056 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 SERTM2A0A1B0GWG4 89 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 CEACAM3P40198 252 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 RELQ04864 619 aaPredicted RBP10.48□□□□□ -0.73
SRP54-201ENST00000216774 LDLRAD2Q5SZI1 272 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 CFHR4Q92496 578 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 MS4A6AQ9H2W1 248 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
SRP54-201ENST00000216774 hDV102S1A0JD36 115 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 CT45A10P0DMU9 189 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 CRIP1P50238 77 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 ZNF138P52744 262 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 TCF15Q12870 199 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 ZNF672Q499Z4 452 aaPredicted RBP10.47□□□□□ -0.73
SRP54-201ENST00000216774 ZNF493Q6ZR52 646 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 BSNQ9UPA5 3926 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 MAP1BP46821 2468 aaKnown RBP10.47□□□□□ -0.73
SRP54-201ENST00000216774 CCL25O15444 150 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 SFTPCP11686 197 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
SRP54-201ENST00000216774 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms