RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HES1Q14469 280 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 LINC00173Q6ZV60 143 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 Q71RC1 249 aaPredicted RBP10.45□□□□□ -0.74
CTNS-201ENST00000046640 TEX45Q8NA69 505 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 CELSR1Q9NYQ6 3014 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 FAM181BA6NEQ2 426 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 RBP4P02753 201 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 BPIFB3P59826 476 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 NHLH1Q02575 133 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 SRSF12Q8WXF0 261 aaKnown RBP10.45□□□□□ -0.74
CTNS-201ENST00000046640 C19orf24Q9BVV8 132 aa10.45□□□□□ -0.74
CTNS-201ENST00000046640 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 LYZP61626 148 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 FXYD5Q96DB9 178 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
CTNS-201ENST00000046640 TEX22C9J3V5 150 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 LIPFP07098 398 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 CSN3P07498 182 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 IGLL1P15814 213 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 TSPOP30536 169 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
CTNS-201ENST00000046640 RAB1BQ9H0U4 201 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 ARL2-SNX15V9GYD0 113 aa10.44□□□□□ -0.74
CTNS-201ENST00000046640 INS-IGF2F8WCM5 200 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 CRYGBP07316 175 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 A0A1W2PPR1 153 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 FSTL3O95633 263 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 COX19Q49B96 90 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 KLHDC1Q8N7A1 406 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 THAP8Q8NA92 274 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 C22orf15Q8WYQ4 148 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
CTNS-201ENST00000046640 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 HIST1H1EP10412 219 aaKnown RBP10.42□□□□□ -0.74
CTNS-201ENST00000046640 PSG1P11464 419 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 HTR1DP28221 377 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 COTL1Q14019 142 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
CTNS-201ENST00000046640 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
CTNS-201ENST00000046640 ZFHX3Q15911 3703 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 NBEAP1P0C6P0 100 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 TNFRSF14Q92956 283 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 PERPQ96FX8 193 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 TIMD4Q96H15 378 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 FBXL19-AS1Q494R0 122 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 URB1-AS1Q96HZ7 61 aa10.41□□□□□ -0.74
CTNS-201ENST00000046640 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 NCBP2LA6PVI3 153 aaKnown RBP10.4□□□□□ -0.74
CTNS-201ENST00000046640 CRYGCP07315 174 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 SAPCD1Q5SSQ6 148 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 CIARTQ8N365 385 aaPredicted RBP10.4□□□□□ -0.74
CTNS-201ENST00000046640 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.74
CTNS-201ENST00000046640 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 P01737 135 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 IGHV3-23P01764 117 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 TCTAP57738 103 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
CTNS-201ENST00000046640 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 C2orf70A6NJV1 201 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 LY6LH3BQJ8 138 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 PRNTQ86SH4 94 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 DYNAPQ8N1N2 210 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.75
CTNS-201ENST00000046640 DPM3Q9P2X0 92 aa10.4□□□□□ -0.75
CTNS-201ENST00000046640 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 UCNP55089 124 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 BCL6BQ8N143 479 aaPredicted RBP10.39□□□□□ -0.75
CTNS-201ENST00000046640 TRGV9Q99603 122 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 HBBP68871 147 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 UBE2V1Q13404 147 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 RNF151Q2KHN1 245 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 C17orf77Q96MU5 243 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 GPR82Q96P67 336 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 Q9H3A6 140 aa10.39□□□□□ -0.75
CTNS-201ENST00000046640 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
CTNS-201ENST00000046640 SNAI2O43623 268 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 IGLC1P0CG04 106 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 ZFP36P26651 326 aaKnown RBP10.38□□□□□ -0.75
CTNS-201ENST00000046640 FAM231DQ6ZW35 169 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 CHEK1O14757 476 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 UQCRFS1P47985 274 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 TMEM70Q9BUB7 260 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 HIGD1AQ9Y241 93 aa10.38□□□□□ -0.75
CTNS-201ENST00000046640 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 I3L2K1 104 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 NBR2O15453 112 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms