RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
RB1CC1-201ENST00000025008 PRB3Q04118 309 aaPredicted RBP12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 C9JAW5 83 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 C15orf32Q32M92 178 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 FAM168AQ92567 244 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 RNASE6Q93091 150 aaKnown RBP12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 SPRR3Q9UBC9 169 aa12.99□□□□□ -0.33
RB1CC1-201ENST00000025008 TRBV20-1A0A075B6N2 111 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 OOSP1A8MZH6 123 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 STHQ8IWL8 128 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 Q8TAT8 98 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 E9PQ18 207 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 PDE6HQ13956 83 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 ZCCHC24Q8N2G6 241 aaKnown RBP12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 MPDZO75970 2070 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 ARMS2P0C7Q2 107 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 TMEM200BQ69YZ2 307 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 CEP250Q9BV73 2442 aa12.98□□□□□ -0.33
RB1CC1-201ENST00000025008 K7EP13 123 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 NEGR1Q7Z3B1 354 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 LINC00479Q96M42 142 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 MYMXA0A1B0GTQ4 84 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 K7EP34 96 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 ZFP36L1Q07352 338 aaKnown RBP12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 EDA2RQ9HAV5 297 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 F8W1H4 67 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 NPC2P61916 151 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 CHCHD5Q9BSY4 110 aa12.97□□□□□ -0.33
RB1CC1-201ENST00000025008 PDCD11Q14690 1871 aaKnown RBP12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 FAM231DQ6ZW35 169 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 PPDPFLQ8WWR9 84 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 TRAV8-3A0A0A6YYJ7 113 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 SLAQ13239 276 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 PSME4Q14997 1843 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 SBF2Q86WG5 1849 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 TRAV40A0A0B4J280 105 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 IL18BPO95998 194 aa12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.33
RB1CC1-201ENST00000025008 SRRM4A7MD48 611 aaKnown RBP12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 PAX4O43316 350 aa12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 CFHR1Q03591 330 aa12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 C14orf178Q8N769 122 aaPredicted RBP12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 PAX9P55771 341 aa12.96□□□□□ -0.34
RB1CC1-201ENST00000025008 COX8AP10176 69 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 C20orf204Q6ZNR8 217 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 TIMM21Q9BVV7 248 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 SHANK2-AS3Q9BTD1 123 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 IGLL1P15814 213 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 VDAC2P45880 294 aaPredicted RBP12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 RSPO3Q9BXY4 272 aaPredicted RBP12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 JPT2Q9H910 190 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 ARHGEF17Q96PE2 2063 aaPredicted RBP12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 IGKV1-6A0A0C4DH72 117 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 CRIPAKQ8N1N5 446 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 SPANXDQ9BXN6 97 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 SIGLEC9Q9Y336 463 aa12.95□□□□□ -0.34
RB1CC1-201ENST00000025008 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 WNT2P09544 360 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 DNAJC30Q96LL9 226 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 THBDP07204 575 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 ZNF474Q6S9Z5 364 aaPredicted RBP12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 LY6G5BQ8NDX9 201 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 C5orf64Q2M2E5 130 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 SRSF8Q9BRL6 282 aaKnown RBP12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 V9GYV3 84 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 ETDBQ3ZM63 59 aa12.94□□□□□ -0.34
RB1CC1-201ENST00000025008 C9orf153Q5TBE3 101 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 MINOS1Q5TGZ0 78 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 C1orf147Q96MC9 270 aaPredicted RBP12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 MINOS1-NBL1R4GNA1 71 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 RPL36AP83881 106 aaKnown RBP12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 RPL36ALQ969Q0 106 aaKnown RBP12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 LYNX1G3V0Z9 82 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 LEPROTO15243 131 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 LYNX1P0DP58 116 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 RCHY1Q96PM5 261 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 PLXNA1Q9UIW2 1896 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
RB1CC1-201ENST00000025008 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms