RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Pam16Q9CQV1 125 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Urm1Q9D2P4 101 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tex43Q9D9I1 141 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vmn1r47Q9EQ51 310 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Clec4eQ9R0Q8 214 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm28845A0A087WR76 214 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Igkv6-14A0A140T8P1 115 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm8653K9J7G2 307 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vmn1r117L7N2C9 307 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Fgf2P15655 154 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Cdx2P43241 311 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tas2r41P59532 308 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ube2g2P60605 165 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Btg2Q04211 158 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Spink11Q09TK7 88 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Patz1Q5NBY9 687 aaKnown RBP12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 GfralQ6SJE0 393 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 SheQ8BSD5 492 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr368Q8VF22 327 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr355Q8VFP6 310 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ythdf2Q91YT7 579 aaKnown RBP12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vmn1r44Q9EQ47 310 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr945Q9EQB5 319 aa12.5□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr588-ps1A0A1B0GSZ2 313 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Slc35d1A2AKQ0 355 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tm4sf19E9Q9H8 206 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 PilraQ2YFS3 302 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Chchd1Q9CQA6 118 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ms4a4cQ9D3F6 226 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Igkv4-50A0A0B4J1J0 117 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 1700025C18RikA2A580 89 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 H60bB1B212 251 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Hspb7P35385 169 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Bcl2l2P70345 193 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Sfrp2P97299 295 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Wfdc9Q3UW41 83 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Sap30lQ5SQF8 182 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Pafah1b2Q61206 229 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 BsxQ810B3 232 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Lypd6Q8BPP5 171 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Smim4Q8C1Q6 80 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr346Q8VGJ7 309 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gar1Q9CY66 231 aaKnown RBP12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Cd200r1Q9ES57 326 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 CcsQ9WU84 274 aa12.49□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tgfbr3lD3YZZ2 297 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm5129F6YHA9 99 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 AponG3X9D6 251 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm11027G8JL69 66 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Pmp2P24526 132 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gabrg3P27681 467 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm10334Q792Y8 246 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Cdc34Q8CFI2 235 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Mib2Q8R516 973 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr338Q8VGK6 306 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gp2Q9D733 531 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 ApooQ9DCZ4 198 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Nudt3Q9JI46 168 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ccr8P56484 353 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ypel3P61237 119 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 F7P70375 446 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vmn1r26Q8R2D7 339 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ms4a6cQ99N08 217 aa12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Cisd2Q9CQB5 135 aaKnown RBP12.48□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm20877J3QPZ4 227 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 KrasP32883 189 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tnfsf8P32972 239 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Cxcl12P40224 93 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 RanP62827 216 aaKnown RBP12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Zfp386Q1WWJ5 626 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr875Q7TRE5 310 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr335-psQ7TRY6 312 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 9030612E09RikQ8CE20 140 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tspan2Q922J6 221 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr1248A0A1L1SSZ5 307 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm20422E9PUR3 255 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Sh2d1bO35324 132 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Timp1P12032 205 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Gm16686Q3UMN9 131 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 CybaQ61462 192 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr917Q7TRC3 309 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Psg16Q8K0U8 395 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vmn1r89Q8R256 316 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 PigcQ9CXR4 297 aa12.47□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Trav6-1A0A075B5Z8 112 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ighv1-18A0A0A6YXN4 117 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Zfp980A2A9J5 645 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Zfp931A2AHM2 298 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr1320A2AHM8 319 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Olfr920E9Q413 310 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ifitm7G3X9Z2 141 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Foxf2O54743 446 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 SelenotP62342 195 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Prdm6Q3UZD5 596 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Tmeff1Q6PFE7 372 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vgll4Q80V24 287 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 AdtrpQ8C138 230 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Vwc2Q8C8N3 324 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Klre1Q8CJC7 226 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 PaxxQ8K0Y7 205 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms