RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Lrrc29A0A1B0GQY9 621 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1053L7MU59 313 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Txn2P97493 166 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Tmem256Q5F285 113 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Hist2h2beQ64524 126 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Ubald1Q6P3B2 176 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Onecut2Q6XBJ3 505 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1102Q8VES2 324 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1342Q8VFY3 315 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Cby1Q9D1C2 127 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Vmn1r171Q9EPS6 316 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr959Q9EQ86 311 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Lhx2Q9Z0S2 406 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Greb1Q3UHK3 1954 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Klri1B2KG20 248 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Ankrd66J3QNN4 192 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 H2-M10.1O19443 331 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Tnfsf12O54907 249 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Hoxd11P23813 323 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Fgf7P36363 194 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Timm8bP62077 83 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Rpl19P84099 196 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Rtp3Q5QGU6 474 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 PcolceQ61398 468 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Rnf144bQ8BKD6 301 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Commd9Q8K2Q0 198 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Pcgf1Q8R023 259 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1462Q8VFW3 307 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gar1Q9CY66 231 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Dtwd2Q9D0U1 298 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Ms4a4cQ9D3F6 226 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Fbxo24Q9D417 589 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Igkv4-63A0A0G2JFU6 117 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Lrrc3cA0A1B0GRI5 255 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Vmn1r232A2RTT5 351 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 4930435E12RikA6X8Z9 381 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 1700009N14RikQ14AA6 216 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Mgst3Q9CPU4 153 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Vmn1r44Q9EQ47 310 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 LitafQ9JLJ0 161 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Cldn10Q9Z0S6 231 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Mecp2Q9Z2D6 484 aaKnown RBP9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Ccpg1osV9GXK1 122 aa9.25□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm29049A0A087WSM5 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm42543A0A0G2JET4 117 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Tmem92B7ZWI3 162 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm21118J3QPK8 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Sumo1P63166 101 aaKnown RBP9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20909Q5FWB5 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20852Q5M8R5 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Usf1Q61069 310 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20917Q62457 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20809Q62458 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20865Q62460 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Zfp874bQ7M6X2 447 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr138Q7TRI7 312 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20738Q810R8 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1324Q8VEU7 332 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm20806Q9D9T3 227 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 RprmQ9JJ72 109 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Wisp3D3Z5L9 354 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 ClcP97400 68 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Mtch1Q791T5 389 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Q8BG31 207 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Tusc5Q8C838 173 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1413Q8VGU3 323 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Scgb3a2Q920H1 91 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Mrpl30Q9D7N6 160 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Q9DAA3 117 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Zfpl1Q9DB43 310 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr894Q9EQB2 313 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Zcchc24B2RVL6 241 aaKnown RBP9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1406E9Q8X1 310 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 GzmfP08883 248 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Cfhr1Q61406 343 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Oxgr1Q6IYF8 337 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr335-psQ7TRY6 312 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Slc50a1Q9CXK4 221 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Fkbp11Q9D1M7 201 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Lrrk2Q5S006 2527 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Dennd4cA6H8H2 1906 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Slc25a53A2AF28 346 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Slc25a35Q5SWT3 300 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Psmb6Q60692 238 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 HrasQ61411 189 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 IdnkQ8R0J8 184 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Rbpms2Q8VC52 206 aaKnown RBP9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Neurl1Q923S6 574 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Ndufb10Q9DCS9 176 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Vmn1r47Q9EQ51 310 aa9.24□□□□□ -0.93
Msh3-201ENSMUST00000022220 Olfr1118A0A0J9YUE7 307 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 A0A1L1SR50 188 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm14325A2AW67 498 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 H2-M5A7VMS3 348 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gm10130F6ZHM5 101 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Vmn1r113G3UWI8 307 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Gnb1P62874 340 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Bcl2l2P70345 193 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 9430097D07RikQ8BS47 195 aa9.23□□□□□ -0.93
Msh3-201ENSMUST00000022220 Q8VCE4 163 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms