RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W TGS1Q12052 315 aa2.46□□□□□ -2.02
YOP1YPR028W RDL1Q12305 139 aaKnown RBP2.46□□□□□ -2.02
YOP1YPR028W RNR3P21672 869 aaKnown RBP2.45□□□□□ -2.02
YOP1YPR028W PCL2P25693 308 aa2.45□□□□□ -2.02
YOP1YPR028W GSY2P27472 705 aa2.45□□□□□ -2.02
YOP1YPR028W YKU70P32807 602 aa2.45□□□□□ -2.02
YOP1YPR028W DHR2P36009 735 aaPredicted RBP2.45□□□□□ -2.02
YOP1YPR028W ARC40P38328 384 aaKnown RBP2.45□□□□□ -2.02
YOP1YPR028W BEM4P39011 633 aa2.45□□□□□ -2.02
YOP1YPR028W YIL092WP40497 633 aa2.45□□□□□ -2.02
YOP1YPR028W YFL015CP43578 164 aa2.45□□□□□ -2.02
YOP1YPR028W LYS20P48570 428 aaKnown RBP2.45□□□□□ -2.02
YOP1YPR028W YGR054WP53235 642 aaKnown RBP2.45□□□□□ -2.02
YOP1YPR028W YPL071CQ02864 156 aa2.45□□□□□ -2.02
YOP1YPR028W FDC1Q03034 503 aa2.45□□□□□ -2.02
YOP1YPR028W YLR407WQ06070 228 aa2.45□□□□□ -2.02
YOP1YPR028W FPR4Q06205 392 aaPredicted RBP2.45□□□□□ -2.02
YOP1YPR028W YLR001CQ07895 862 aa2.45□□□□□ -2.02
YOP1YPR028W YLR111WQ12528 110 aa2.45□□□□□ -2.02
YOP1YPR028W BI2P03873 423 aa2.44□□□□□ -2.02
YOP1YPR028W SFL1P20134 766 aa2.44□□□□□ -2.02
YOP1YPR028W YCP4P25349 247 aaKnown RBP2.44□□□□□ -2.02
YOP1YPR028W PCM1P38628 557 aaKnown RBP2.44□□□□□ -2.02
YOP1YPR028W CFD1P40558 293 aa2.44□□□□□ -2.02
YOP1YPR028W OSW7P43611 510 aa2.44□□□□□ -2.02
YOP1YPR028W TIM50Q02776 476 aa2.44□□□□□ -2.02
YOP1YPR028W GRS2Q06817 618 aa2.44□□□□□ -2.02
YOP1YPR028W NRT1Q08485 598 aa2.44□□□□□ -2.02
YOP1YPR028W YEL076C-AP0CX16 216 aa2.43□□□□□ -2.02
YOP1YPR028W YLR464WP0CX17 216 aa2.43□□□□□ -2.02
YOP1YPR028W YBR139WP38109 508 aa2.43□□□□□ -2.02
YOP1YPR028W BRN1P38170 754 aa2.43□□□□□ -2.02
YOP1YPR028W YEL076CP39971 216 aa2.43□□□□□ -2.02
YOP1YPR028W YEL025CP39991 1188 aa2.43□□□□□ -2.02
YOP1YPR028W BUD8P41698 603 aa2.43□□□□□ -2.02
YOP1YPR028W RNH70P53331 553 aa2.43□□□□□ -2.02
YOP1YPR028W ALG12P53730 551 aa2.43□□□□□ -2.02
YOP1YPR028W WAR1Q03631 944 aa2.43□□□□□ -2.02
YOP1YPR028W POB3Q04636 552 aaKnown RBP2.43□□□□□ -2.02
YOP1YPR028W YPS7Q06325 596 aa2.43□□□□□ -2.02
YOP1YPR028W AIM44Q99299 758 aa2.43□□□□□ -2.02
YOP1YPR028W IME1P21190 360 aa2.42□□□□□ -2.02
YOP1YPR028W RRP14P36080 434 aaKnown RBP2.42□□□□□ -2.02
YOP1YPR028W CRG1P38892 291 aaRIP-Chip data2.42□□□□□ -2.02not detected
YOP1YPR028W MET13P53128 600 aa2.42□□□□□ -2.02
YOP1YPR028W YNL193WP53870 558 aa2.42□□□□□ -2.02
YOP1YPR028W ORC1P54784 914 aaPredicted RBP2.42□□□□□ -2.02
YOP1YPR028W YPT1P01123 206 aaKnown RBP2.41□□□□□ -2.02
YOP1YPR028W RTT107P38850 1070 aa2.41□□□□□ -2.02
YOP1YPR028W FTR1P40088 404 aa2.41□□□□□ -2.02
YOP1YPR028W YIR016WP40572 265 aa2.41□□□□□ -2.02
YOP1YPR028W IRC7P43623 340 aa2.41□□□□□ -2.02
YOP1YPR028W SAP4P53036 818 aa2.41□□□□□ -2.02
YOP1YPR028W RPS15Q01855 142 aaKnown RBP2.41□□□□□ -2.02
YOP1YPR028W TFB2Q02939 513 aa2.41□□□□□ -2.02
YOP1YPR028W SPN1Q06505 410 aaPredicted RBP2.41□□□□□ -2.02
YOP1YPR028W GUD1Q07729 489 aa2.41□□□□□ -2.02
YOP1YPR028W RPL8AP17076 256 aaKnown RBP2.4□□□□□ -2.03
YOP1YPR028W HOP1P20050 605 aa2.4□□□□□ -2.03
YOP1YPR028W CAP1P28495 268 aaKnown RBP2.4□□□□□ -2.03
YOP1YPR028W PRE4P30657 266 aa2.4□□□□□ -2.03
YOP1YPR028W PPG1P32838 368 aa2.4□□□□□ -2.03
YOP1YPR028W MTG2P38860 518 aa2.4□□□□□ -2.03
YOP1YPR028W TDA10P42938 290 aa2.4□□□□□ -2.03
YOP1YPR028W MDV1P47025 714 aa2.4□□□□□ -2.03
YOP1YPR028W TAF4P50105 388 aa2.4□□□□□ -2.03
YOP1YPR028W COP1P53622 1201 aaKnown RBP2.4□□□□□ -2.03
YOP1YPR028W RPL15BP54780 204 aaPredicted RBP2.4□□□□□ -2.03
YOP1YPR028W HLR1Q04429 423 aa2.4□□□□□ -2.03
YOP1YPR028W NOP14Q99207 810 aaKnown RBP2.4□□□□□ -2.03
YOP1YPR028W CCL1P37366 393 aa2.39□□□□□ -2.03
YOP1YPR028W MGS1P40151 587 aa2.39□□□□□ -2.03
YOP1YPR028W SAE2P46946 345 aa2.39□□□□□ -2.03
YOP1YPR028W BOP3P53958 396 aa2.39□□□□□ -2.03
YOP1YPR028W DNM1P54861 757 aa2.39□□□□□ -2.03
YOP1YPR028W RTT103Q05543 409 aa2.39□□□□□ -2.03
YOP1YPR028W STP4Q07351 490 aa2.39□□□□□ -2.03
YOP1YPR028W AIM41Q12032 185 aa2.39□□□□□ -2.03
YOP1YPR028W AHA1Q12449 350 aaKnown RBP2.39□□□□□ -2.03
YOP1YPR028W RPS17AP02407 136 aaKnown RBP2.38□□□□□ -2.03
YOP1YPR028W RPS17BP14127 136 aaKnown RBP2.38□□□□□ -2.03
YOP1YPR028W AIM17P23180 465 aaKnown RBP2.38□□□□□ -2.03
YOP1YPR028W COQ3P27680 312 aa2.38□□□□□ -2.03
YOP1YPR028W TDA3P38758 523 aa2.38□□□□□ -2.03
YOP1YPR028W NMD2P38798 1089 aaKnown RBP2.38□□□□□ -2.03
YOP1YPR028W MNN1P39106 762 aa2.38□□□□□ -2.03
YOP1YPR028W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YOP1YPR028W YCR043CP25361 127 aa2.37□□□□□ -2.03
YOP1YPR028W SKP2P42843 763 aa2.37□□□□□ -2.03
YOP1YPR028W NOP15P53927 220 aaPredicted RBP2.37□□□□□ -2.03
YOP1YPR028W NSE5Q03718 556 aa2.37□□□□□ -2.03
YOP1YPR028W PCL8Q08966 492 aa2.37□□□□□ -2.03
YOP1YPR028W SWI6P09959 803 aa2.36□□□□□ -2.03
YOP1YPR028W RPT3P33298 428 aaKnown RBP2.36□□□□□ -2.03
YOP1YPR028W FMP46P36141 133 aaKnown RBP2.36□□□□□ -2.03
YOP1YPR028W SCO2P38072 301 aa2.36□□□□□ -2.03
YOP1YPR028W EHT1P38295 451 aa2.36□□□□□ -2.03
YOP1YPR028W PRM2P40534 656 aa2.36□□□□□ -2.03
YOP1YPR028W RET2P43621 546 aa2.36□□□□□ -2.03
YOP1YPR028W YJR096WP47137 282 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms